Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
Sh3kbp1Q8R550 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Sh3kbp1Q8R550 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Sh3kbp1Q8R550 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3kbp1Q8R550 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3kbp1Q8R550 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.11■■□□□ 1.29
Sh3kbp1Q8R550 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Sh3kbp1Q8R550 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3kbp1Q8R550 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3kbp1Q8R550 Gm14523-201ENSMUST00000117260 558 ntBASIC23.1■■□□□ 1.29
Sh3kbp1Q8R550 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Sh3kbp1Q8R550 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Sh3kbp1Q8R550 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3kbp1Q8R550 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3kbp1Q8R550 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Sh3kbp1Q8R550 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Sh3kbp1Q8R550 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Sh3kbp1Q8R550 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3kbp1Q8R550 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.06■■□□□ 1.28
Sh3kbp1Q8R550 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3kbp1Q8R550 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Sh3kbp1Q8R550 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3kbp1Q8R550 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3kbp1Q8R550 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Sh3kbp1Q8R550 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Sh3kbp1Q8R550 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Sh3kbp1Q8R550 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.02■■□□□ 1.28
Sh3kbp1Q8R550 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3kbp1Q8R550 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3kbp1Q8R550 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Sh3kbp1Q8R550 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Sh3kbp1Q8R550 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Sh3kbp1Q8R550 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
Sh3kbp1Q8R550 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Sh3kbp1Q8R550 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.98■■□□□ 1.27
Sh3kbp1Q8R550 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3kbp1Q8R550 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3kbp1Q8R550 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Sh3kbp1Q8R550 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3kbp1Q8R550 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.97■■□□□ 1.27
Sh3kbp1Q8R550 Terc-201ENSMUST00000082862 423 ntBASIC22.97■■□□□ 1.27
Sh3kbp1Q8R550 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Sh3kbp1Q8R550 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Sh3kbp1Q8R550 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.96■■□□□ 1.27
Sh3kbp1Q8R550 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.96■■□□□ 1.27
Sh3kbp1Q8R550 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3kbp1Q8R550 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.96■■□□□ 1.27
Sh3kbp1Q8R550 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Sh3kbp1Q8R550 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sh3kbp1Q8R550 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Sh3kbp1Q8R550 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.95■■□□□ 1.26
Sh3kbp1Q8R550 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Sh3kbp1Q8R550 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms