Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 AC142086.6-201ENST00000621154 1765 ntBASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SPTSSBQ8NFR3 CLDN5-201ENST00000403084 2357 ntBASIC13.69□□□□□ -0.22
SPTSSBQ8NFR3 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC13.69□□□□□ -0.22
SPTSSBQ8NFR3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC13.69□□□□□ -0.22
SPTSSBQ8NFR3 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC13.69□□□□□ -0.22
SPTSSBQ8NFR3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SPTSSBQ8NFR3 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 AC120057.4-201ENST00000624722 1615 ntBASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 AL121749.1-202ENST00000609313 2153 ntBASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SPTSSBQ8NFR3 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC13.67□□□□□ -0.22
SPTSSBQ8NFR3 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPTSSBQ8NFR3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
SPTSSBQ8NFR3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC13.66□□□□□ -0.22
SPTSSBQ8NFR3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SPTSSBQ8NFR3 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.66□□□□□ -0.22
SPTSSBQ8NFR3 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SPTSSBQ8NFR3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 LINC00543-201ENST00000567234 1845 ntBASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SPTSSBQ8NFR3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SPTSSBQ8NFR3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC13.62□□□□□ -0.23
SPTSSBQ8NFR3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 AC133561.1-201ENST00000568600 2415 ntBASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SPTSSBQ8NFR3 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 AC093323.1-202ENST00000635031 2045 ntBASIC13.6□□□□□ -0.23
SPTSSBQ8NFR3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms