Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC100797.4-201ENST00000631653 1827 ntBASIC37.65■■■■□ 3.62
ABCA6Q8N139 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC37.64■■■■□ 3.62
ABCA6Q8N139 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC37.64■■■■□ 3.62
ABCA6Q8N139 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC37.64■■■■□ 3.62
ABCA6Q8N139 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC37.64■■■■□ 3.62
ABCA6Q8N139 PFN2-211ENST00000489155 636 ntTSL 4 BASIC37.64■■■■□ 3.62
ABCA6Q8N139 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC37.63■■■■□ 3.61
ABCA6Q8N139 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
ABCA6Q8N139 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC37.62■■■■□ 3.61
ABCA6Q8N139 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC37.61■■■■□ 3.61
ABCA6Q8N139 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
ABCA6Q8N139 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC37.61■■■■□ 3.61
ABCA6Q8N139 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC37.61■■■■□ 3.61
ABCA6Q8N139 YBX1P4-201ENST00000392794 808 ntBASIC37.61■■■■□ 3.61
ABCA6Q8N139 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC37.61■■■■□ 3.61
ABCA6Q8N139 AP004833.2-201ENST00000532228 1454 ntBASIC37.6■■■■□ 3.61
ABCA6Q8N139 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC37.6■■■■□ 3.61
ABCA6Q8N139 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC37.6■■■■□ 3.61
ABCA6Q8N139 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC37.59■■■■□ 3.61
ABCA6Q8N139 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC37.59■■■■□ 3.61
ABCA6Q8N139 MIR3960-201ENST00000583311 91 ntBASIC37.59■■■■□ 3.61
ABCA6Q8N139 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
ABCA6Q8N139 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC37.58■■■■□ 3.61
ABCA6Q8N139 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC37.58■■■■□ 3.61
ABCA6Q8N139 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC37.58■■■■□ 3.61
ABCA6Q8N139 PRTG-204ENST00000561292 833 ntTSL 3 BASIC37.58■■■■□ 3.61
ABCA6Q8N139 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC37.57■■■■□ 3.61
ABCA6Q8N139 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC37.57■■■■□ 3.61
ABCA6Q8N139 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
ABCA6Q8N139 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC37.57■■■■□ 3.6
ABCA6Q8N139 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC37.57■■■■□ 3.6
ABCA6Q8N139 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC37.56■■■■□ 3.6
ABCA6Q8N139 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC37.56■■■■□ 3.6
ABCA6Q8N139 AL356441.2-201ENST00000443009 864 ntBASIC37.55■■■■□ 3.6
ABCA6Q8N139 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
ABCA6Q8N139 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC37.55■■■■□ 3.6
ABCA6Q8N139 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC37.55■■■■□ 3.6
ABCA6Q8N139 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC37.55■■■■□ 3.6
ABCA6Q8N139 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC37.55■■■■□ 3.6
ABCA6Q8N139 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC37.54■■■■□ 3.6
ABCA6Q8N139 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC37.54■■■■□ 3.6
ABCA6Q8N139 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC37.54■■■■□ 3.6
ABCA6Q8N139 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC37.53■■■■□ 3.6
ABCA6Q8N139 HYI-210ENST00000486909 905 ntTSL 5 BASIC37.53■■■■□ 3.6
ABCA6Q8N139 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.53■■■■□ 3.6
ABCA6Q8N139 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
ABCA6Q8N139 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC37.52■■■■□ 3.6
ABCA6Q8N139 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC37.52■■■■□ 3.6
ABCA6Q8N139 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC37.5■■■■□ 3.59
ABCA6Q8N139 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC37.5■■■■□ 3.59
ABCA6Q8N139 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC37.5■■■■□ 3.59
ABCA6Q8N139 IDNK-203ENST00000405990 629 ntTSL 2 BASIC37.5■■■■□ 3.59
ABCA6Q8N139 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC37.49■■■■□ 3.59
ABCA6Q8N139 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC37.49■■■■□ 3.59
ABCA6Q8N139 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC37.48■■■■□ 3.59
ABCA6Q8N139 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.48■■■■□ 3.59
ABCA6Q8N139 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC37.48■■■■□ 3.59
ABCA6Q8N139 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC37.48■■■■□ 3.59
ABCA6Q8N139 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC37.48■■■■□ 3.59
ABCA6Q8N139 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC37.47■■■■□ 3.59
ABCA6Q8N139 IDNK-201ENST00000376417 511 ntTSL 5 BASIC37.47■■■■□ 3.59
ABCA6Q8N139 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC37.47■■■■□ 3.59
ABCA6Q8N139 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC37.46■■■■□ 3.59
ABCA6Q8N139 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC37.46■■■■□ 3.59
ABCA6Q8N139 AL031848.2-201ENST00000607670 837 ntBASIC37.45■■■■□ 3.59
ABCA6Q8N139 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC37.45■■■■□ 3.59
ABCA6Q8N139 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC37.45■■■■□ 3.59
ABCA6Q8N139 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC37.45■■■■□ 3.59
ABCA6Q8N139 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC37.44■■■■□ 3.58
ABCA6Q8N139 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC37.44■■■■□ 3.58
ABCA6Q8N139 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC37.43■■■■□ 3.58
ABCA6Q8N139 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC37.43■■■■□ 3.58
ABCA6Q8N139 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC37.43■■■■□ 3.58
ABCA6Q8N139 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC37.43■■■■□ 3.58
ABCA6Q8N139 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC37.42■■■■□ 3.58
ABCA6Q8N139 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC37.42■■■■□ 3.58
ABCA6Q8N139 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
ABCA6Q8N139 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC37.41■■■■□ 3.58
ABCA6Q8N139 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC37.41■■■■□ 3.58
ABCA6Q8N139 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC37.41■■■■□ 3.58
ABCA6Q8N139 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC37.4■■■■□ 3.58
ABCA6Q8N139 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC37.39■■■■□ 3.58
ABCA6Q8N139 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC37.38■■■■□ 3.58
ABCA6Q8N139 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.58
ABCA6Q8N139 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC37.38■■■■□ 3.57
ABCA6Q8N139 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
ABCA6Q8N139 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC37.38■■■■□ 3.57
ABCA6Q8N139 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC37.38■■■■□ 3.57
ABCA6Q8N139 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC37.37■■■■□ 3.57
ABCA6Q8N139 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC37.37■■■■□ 3.57
ABCA6Q8N139 LSM7-203ENST00000585409 512 ntTSL 2 BASIC37.37■■■■□ 3.57
ABCA6Q8N139 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC37.37■■■■□ 3.57
ABCA6Q8N139 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC37.36■■■■□ 3.57
ABCA6Q8N139 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
ABCA6Q8N139 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC37.35■■■■□ 3.57
ABCA6Q8N139 ST7-AS1-201ENST00000456775 1889 ntBASIC37.35■■■■□ 3.57
ABCA6Q8N139 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC37.35■■■■□ 3.57
ABCA6Q8N139 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC37.35■■■■□ 3.57
ABCA6Q8N139 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC37.34■■■■□ 3.57
ABCA6Q8N139 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC37.34■■■■□ 3.57
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms