Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.47■■■□□ 2.47
Ddx54Q8K4L0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Ddx54Q8K4L0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC30.46■■■□□ 2.47
Ddx54Q8K4L0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ddx54Q8K4L0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
Ddx54Q8K4L0 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx54Q8K4L0 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx54Q8K4L0 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx54Q8K4L0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
Ddx54Q8K4L0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.44■■■□□ 2.46
Ddx54Q8K4L0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Ddx54Q8K4L0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ddx54Q8K4L0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ddx54Q8K4L0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
Ddx54Q8K4L0 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ddx54Q8K4L0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ddx54Q8K4L0 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ddx54Q8K4L0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC30.41■■■□□ 2.46
Ddx54Q8K4L0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Ddx54Q8K4L0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Ddx54Q8K4L0 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC30.39■■■□□ 2.46
Ddx54Q8K4L0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ddx54Q8K4L0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Ddx54Q8K4L0 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
Ddx54Q8K4L0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx54Q8K4L0 AC117769.4-201ENSMUST00000225679 685 ntBASIC30.36■■■□□ 2.45
Ddx54Q8K4L0 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
Ddx54Q8K4L0 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx54Q8K4L0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ddx54Q8K4L0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ddx54Q8K4L0 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ddx54Q8K4L0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ddx54Q8K4L0 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC30.34■■■□□ 2.45
Ddx54Q8K4L0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Ddx54Q8K4L0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Ddx54Q8K4L0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Gm37847-201ENSMUST00000192163 1497 ntBASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Gm31748-201ENSMUST00000194938 1497 ntBASIC30.31■■■□□ 2.44
Ddx54Q8K4L0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
Ddx54Q8K4L0 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC30.3■■■□□ 2.44
Ddx54Q8K4L0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Ddx54Q8K4L0 Gm10232-201ENSMUST00000089221 720 ntBASIC30.3■■■□□ 2.44
Ddx54Q8K4L0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC30.3■■■□□ 2.44
Ddx54Q8K4L0 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ddx54Q8K4L0 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Ddx54Q8K4L0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC30.28■■■□□ 2.44
Ddx54Q8K4L0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ddx54Q8K4L0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
Ddx54Q8K4L0 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Ddx54Q8K4L0 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Ddx54Q8K4L0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Ddx54Q8K4L0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.26■■■□□ 2.43
Ddx54Q8K4L0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC30.26■■■□□ 2.43
Ddx54Q8K4L0 Gm5297-201ENSMUST00000198555 1171 ntBASIC30.25■■■□□ 2.43
Ddx54Q8K4L0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Ddx54Q8K4L0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ddx54Q8K4L0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ddx54Q8K4L0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
Ddx54Q8K4L0 Gm43445-201ENSMUST00000198564 2091 ntBASIC30.24■■■□□ 2.43
Ddx54Q8K4L0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Ddx54Q8K4L0 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Ddx54Q8K4L0 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC30.22■■■□□ 2.43
Ddx54Q8K4L0 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Ddx54Q8K4L0 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ddx54Q8K4L0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Ddx54Q8K4L0 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC30.2■■■□□ 2.43
Ddx54Q8K4L0 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Ddx54Q8K4L0 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC30.2■■■□□ 2.43
Ddx54Q8K4L0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.42
Ddx54Q8K4L0 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
Ddx54Q8K4L0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ddx54Q8K4L0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
Ddx54Q8K4L0 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC30.18■■■□□ 2.42
Ddx54Q8K4L0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Ddx54Q8K4L0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ddx54Q8K4L0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC30.17■■■□□ 2.42
Ddx54Q8K4L0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Ddx54Q8K4L0 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
Ddx54Q8K4L0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 Gm13241-201ENSMUST00000094493 780 ntBASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
Ddx54Q8K4L0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
Ddx54Q8K4L0 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC30.15■■■□□ 2.42
Ddx54Q8K4L0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC30.15■■■□□ 2.42
Ddx54Q8K4L0 Gm43034-201ENSMUST00000198678 1364 ntBASIC30.15■■■□□ 2.42
Ddx54Q8K4L0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30.14■■■□□ 2.42
Ddx54Q8K4L0 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.14■■■□□ 2.42
Ddx54Q8K4L0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Ddx54Q8K4L0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC30.13■■■□□ 2.41
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms