Protein–RNA interactions for Protein: Q8K440

Abca8b, ATP-binding cassette sub-family A member 8-B, mousemouse

Predictions only

Length 1,620 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca8bQ8K440 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Abca8bQ8K440 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
Abca8bQ8K440 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
Abca8bQ8K440 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
Abca8bQ8K440 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC34.7■■■■□ 3.14
Abca8bQ8K440 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC34.69■■■■□ 3.14
Abca8bQ8K440 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC34.68■■■■□ 3.14
Abca8bQ8K440 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC34.68■■■■□ 3.14
Abca8bQ8K440 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC34.68■■■■□ 3.14
Abca8bQ8K440 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
Abca8bQ8K440 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC34.67■■■■□ 3.14
Abca8bQ8K440 Gm42501-201ENSMUST00000200220 1026 ntBASIC34.66■■■■□ 3.14
Abca8bQ8K440 Gm18755-201ENSMUST00000218030 1099 ntBASIC34.66■■■■□ 3.14
Abca8bQ8K440 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC34.66■■■■□ 3.14
Abca8bQ8K440 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Abca8bQ8K440 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Abca8bQ8K440 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC34.65■■■■□ 3.14
Abca8bQ8K440 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC34.65■■■■□ 3.14
Abca8bQ8K440 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC34.64■■■■□ 3.14
Abca8bQ8K440 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
Abca8bQ8K440 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
Abca8bQ8K440 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC34.63■■■■□ 3.13
Abca8bQ8K440 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
Abca8bQ8K440 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC34.62■■■■□ 3.13
Abca8bQ8K440 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Abca8bQ8K440 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Abca8bQ8K440 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC34.61■■■■□ 3.13
Abca8bQ8K440 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Abca8bQ8K440 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC34.6■■■■□ 3.13
Abca8bQ8K440 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC34.6■■■■□ 3.13
Abca8bQ8K440 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
Abca8bQ8K440 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
Abca8bQ8K440 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC34.59■■■■□ 3.13
Abca8bQ8K440 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC34.59■■■■□ 3.13
Abca8bQ8K440 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC34.59■■■■□ 3.13
Abca8bQ8K440 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.13
Abca8bQ8K440 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC34.57■■■■□ 3.12
Abca8bQ8K440 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
Abca8bQ8K440 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC34.56■■■■□ 3.12
Abca8bQ8K440 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
Abca8bQ8K440 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC34.55■■■■□ 3.12
Abca8bQ8K440 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC34.55■■■■□ 3.12
Abca8bQ8K440 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC34.55■■■■□ 3.12
Abca8bQ8K440 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC34.55■■■■□ 3.12
Abca8bQ8K440 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC34.54■■■■□ 3.12
Abca8bQ8K440 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Abca8bQ8K440 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC34.53■■■■□ 3.12
Abca8bQ8K440 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC34.53■■■■□ 3.12
Abca8bQ8K440 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC34.52■■■■□ 3.12
Abca8bQ8K440 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC34.52■■■■□ 3.12
Abca8bQ8K440 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC34.52■■■■□ 3.12
Abca8bQ8K440 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC34.49■■■■□ 3.11
Abca8bQ8K440 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC34.49■■■■□ 3.11
Abca8bQ8K440 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Abca8bQ8K440 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC34.49■■■■□ 3.11
Abca8bQ8K440 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
Abca8bQ8K440 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC34.48■■■■□ 3.11
Abca8bQ8K440 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC34.48■■■■□ 3.11
Abca8bQ8K440 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC34.47■■■■□ 3.11
Abca8bQ8K440 AC117769.4-201ENSMUST00000225679 685 ntBASIC34.46■■■■□ 3.11
Abca8bQ8K440 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.11
Abca8bQ8K440 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
Abca8bQ8K440 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
Abca8bQ8K440 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC34.44■■■■□ 3.1
Abca8bQ8K440 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
Abca8bQ8K440 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Abca8bQ8K440 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
Abca8bQ8K440 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Abca8bQ8K440 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Abca8bQ8K440 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC34.43■■■■□ 3.1
Abca8bQ8K440 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
Abca8bQ8K440 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
Abca8bQ8K440 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC34.41■■■■□ 3.1
Abca8bQ8K440 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC34.41■■■■□ 3.1
Abca8bQ8K440 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC34.4■■■■□ 3.1
Abca8bQ8K440 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC34.4■■■■□ 3.1
Abca8bQ8K440 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
Abca8bQ8K440 Gm10232-201ENSMUST00000089221 720 ntBASIC34.4■■■■□ 3.1
Abca8bQ8K440 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Abca8bQ8K440 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
Abca8bQ8K440 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
Abca8bQ8K440 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC34.38■■■■□ 3.09
Abca8bQ8K440 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
Abca8bQ8K440 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Abca8bQ8K440 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Abca8bQ8K440 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Abca8bQ8K440 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC34.37■■■■□ 3.09
Abca8bQ8K440 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC34.36■■■■□ 3.09
Abca8bQ8K440 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Abca8bQ8K440 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Abca8bQ8K440 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Abca8bQ8K440 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms