Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nckap1lQ8K1X4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nckap1lQ8K1X4 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Nckap1lQ8K1X4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nckap1lQ8K1X4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nckap1lQ8K1X4 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.73■■□□□ 1.07
Nckap1lQ8K1X4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Nckap1lQ8K1X4 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Gm11599-201ENSMUST00000118720 878 ntBASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Nckap1lQ8K1X4 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1lQ8K1X4 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1lQ8K1X4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nckap1lQ8K1X4 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nckap1lQ8K1X4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nckap1lQ8K1X4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Nckap1lQ8K1X4 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Nckap1lQ8K1X4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Nckap1lQ8K1X4 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Nckap1lQ8K1X4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nckap1lQ8K1X4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nckap1lQ8K1X4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nckap1lQ8K1X4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Nckap1lQ8K1X4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.64■■□□□ 1.06
Nckap1lQ8K1X4 Gm4799-201ENSMUST00000095396 657 ntBASIC21.64■■□□□ 1.05
Nckap1lQ8K1X4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.64■■□□□ 1.05
Nckap1lQ8K1X4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nckap1lQ8K1X4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nckap1lQ8K1X4 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Nckap1lQ8K1X4 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Nckap1lQ8K1X4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nckap1lQ8K1X4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Nckap1lQ8K1X4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Nckap1lQ8K1X4 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Nckap1lQ8K1X4 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Nckap1lQ8K1X4 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.59■■□□□ 1.05
Nckap1lQ8K1X4 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.59■■□□□ 1.05
Nckap1lQ8K1X4 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 107.5 ms