Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.07■■■□□ 2.56
DDX60Q8IY21 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX60Q8IY21 RARRES2P1-201ENST00000474487 481 ntBASIC31.07■■■□□ 2.56
DDX60Q8IY21 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
DDX60Q8IY21 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
DDX60Q8IY21 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX60Q8IY21 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
DDX60Q8IY21 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC31.06■■■□□ 2.56
DDX60Q8IY21 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
DDX60Q8IY21 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC31.06■■■□□ 2.56
DDX60Q8IY21 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC31.06■■■□□ 2.56
DDX60Q8IY21 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
DDX60Q8IY21 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
DDX60Q8IY21 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX60Q8IY21 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC31.04■■■□□ 2.56
DDX60Q8IY21 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC31.04■■■□□ 2.56
DDX60Q8IY21 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
DDX60Q8IY21 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
DDX60Q8IY21 RP9P-202ENST00000450133 1212 ntBASIC31.04■■■□□ 2.56
DDX60Q8IY21 PFN2-211ENST00000489155 636 ntTSL 4 BASIC31.04■■■□□ 2.56
DDX60Q8IY21 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
DDX60Q8IY21 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC31.03■■■□□ 2.56
DDX60Q8IY21 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
DDX60Q8IY21 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
DDX60Q8IY21 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
DDX60Q8IY21 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
DDX60Q8IY21 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC31.01■■■□□ 2.55
DDX60Q8IY21 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC31■■■□□ 2.55
DDX60Q8IY21 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC31■■■□□ 2.55
DDX60Q8IY21 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
DDX60Q8IY21 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC31■■■□□ 2.55
DDX60Q8IY21 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31■■■□□ 2.55
DDX60Q8IY21 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
DDX60Q8IY21 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
DDX60Q8IY21 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
DDX60Q8IY21 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC30.98■■■□□ 2.55
DDX60Q8IY21 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DDX60Q8IY21 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
DDX60Q8IY21 WHAMMP3-201ENST00000611636 1609 ntBASIC30.97■■■□□ 2.55
DDX60Q8IY21 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.97■■■□□ 2.55
DDX60Q8IY21 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.97■■■□□ 2.55
DDX60Q8IY21 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
DDX60Q8IY21 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC30.97■■■□□ 2.55
DDX60Q8IY21 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC30.96■■■□□ 2.55
DDX60Q8IY21 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.96■■■□□ 2.55
DDX60Q8IY21 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
DDX60Q8IY21 PROC-203ENST00000409048 1586 ntTSL 5 BASIC30.96■■■□□ 2.55
DDX60Q8IY21 MIR3960-201ENST00000583311 91 ntBASIC30.95■■■□□ 2.55
DDX60Q8IY21 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
DDX60Q8IY21 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.95■■■□□ 2.55
DDX60Q8IY21 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
DDX60Q8IY21 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.95■■■□□ 2.54
DDX60Q8IY21 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
DDX60Q8IY21 AL359504.2-201ENST00000605506 1601 ntBASIC30.95■■■□□ 2.54
DDX60Q8IY21 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX60Q8IY21 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX60Q8IY21 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
DDX60Q8IY21 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC30.94■■■□□ 2.54
DDX60Q8IY21 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC30.94■■■□□ 2.54
DDX60Q8IY21 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC30.94■■■□□ 2.54
DDX60Q8IY21 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.93■■■□□ 2.54
DDX60Q8IY21 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
DDX60Q8IY21 DUX4L18-201ENST00000553347 1267 ntBASIC30.93■■■□□ 2.54
DDX60Q8IY21 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.93■■■□□ 2.54
DDX60Q8IY21 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.93■■■□□ 2.54
DDX60Q8IY21 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
DDX60Q8IY21 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
DDX60Q8IY21 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.92■■■□□ 2.54
DDX60Q8IY21 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
DDX60Q8IY21 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.92■■■□□ 2.54
DDX60Q8IY21 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
DDX60Q8IY21 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC30.91■■■□□ 2.54
DDX60Q8IY21 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.91■■■□□ 2.54
DDX60Q8IY21 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.91■■■□□ 2.54
DDX60Q8IY21 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.9■■■□□ 2.54
DDX60Q8IY21 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.9■■■□□ 2.54
DDX60Q8IY21 AL451085.2-201ENST00000605085 799 ntBASIC30.9■■■□□ 2.54
DDX60Q8IY21 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX60Q8IY21 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC30.89■■■□□ 2.54
DDX60Q8IY21 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
DDX60Q8IY21 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
DDX60Q8IY21 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC30.88■■■□□ 2.53
DDX60Q8IY21 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC30.88■■■□□ 2.53
DDX60Q8IY21 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC30.88■■■□□ 2.53
DDX60Q8IY21 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
DDX60Q8IY21 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC30.87■■■□□ 2.53
DDX60Q8IY21 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
DDX60Q8IY21 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC30.87■■■□□ 2.53
DDX60Q8IY21 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
DDX60Q8IY21 DRD5P2-201ENST00000421395 2012 ntBASIC30.86■■■□□ 2.53
DDX60Q8IY21 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX60Q8IY21 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
DDX60Q8IY21 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
DDX60Q8IY21 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC30.86■■■□□ 2.53
DDX60Q8IY21 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
DDX60Q8IY21 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
DDX60Q8IY21 BEX3-202ENST00000372634 753 ntTSL 2 BASIC30.84■■■□□ 2.53
DDX60Q8IY21 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX60Q8IY21 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC30.84■■■□□ 2.53
DDX60Q8IY21 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 8.3 ms