Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
SCUBE3Q8IX30 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.12■■□□□ 1.77
SCUBE3Q8IX30 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.11■■□□□ 1.77
SCUBE3Q8IX30 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCUBE3Q8IX30 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCUBE3Q8IX30 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SCUBE3Q8IX30 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SCUBE3Q8IX30 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SCUBE3Q8IX30 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SCUBE3Q8IX30 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SCUBE3Q8IX30 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SCUBE3Q8IX30 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.09■■□□□ 1.77
SCUBE3Q8IX30 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SCUBE3Q8IX30 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SCUBE3Q8IX30 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.08■■□□□ 1.77
SCUBE3Q8IX30 AL121749.1-202ENST00000609313 2153 ntBASIC26.08■■□□□ 1.77
SCUBE3Q8IX30 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SCUBE3Q8IX30 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SCUBE3Q8IX30 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 AC022413.1-201ENST00000624602 984 ntBASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SCUBE3Q8IX30 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 AC126177.7-201ENST00000547904 679 ntBASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
SCUBE3Q8IX30 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 AC060814.1-201ENST00000554326 538 ntBASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 HSD17B1P1-201ENST00000590052 955 ntBASIC26.05■■□□□ 1.76
SCUBE3Q8IX30 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.04■■□□□ 1.76
SCUBE3Q8IX30 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
SCUBE3Q8IX30 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SCUBE3Q8IX30 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.03■■□□□ 1.76
SCUBE3Q8IX30 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SCUBE3Q8IX30 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SCUBE3Q8IX30 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SCUBE3Q8IX30 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
SCUBE3Q8IX30 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
SCUBE3Q8IX30 GPX1-201ENST00000419349 1106 ntBASIC26.01■■□□□ 1.75
SCUBE3Q8IX30 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SCUBE3Q8IX30 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCUBE3Q8IX30 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCUBE3Q8IX30 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCUBE3Q8IX30 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26■■□□□ 1.75
SCUBE3Q8IX30 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
SCUBE3Q8IX30 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SCUBE3Q8IX30 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SCUBE3Q8IX30 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
SCUBE3Q8IX30 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SCUBE3Q8IX30 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
SCUBE3Q8IX30 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.98■■□□□ 1.75
SCUBE3Q8IX30 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
SCUBE3Q8IX30 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.98■■□□□ 1.75
SCUBE3Q8IX30 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
SCUBE3Q8IX30 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.96■■□□□ 1.75
SCUBE3Q8IX30 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SCUBE3Q8IX30 AP004609.3-201ENST00000610705 1884 ntBASIC25.96■■□□□ 1.75
SCUBE3Q8IX30 BRD4-212ENST00000630599 726 ntTSL 2 BASIC25.95■■□□□ 1.74
SCUBE3Q8IX30 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SCUBE3Q8IX30 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
SCUBE3Q8IX30 AL359504.2-201ENST00000605506 1601 ntBASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 AL157400.5-201ENST00000507624 621 ntBASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 AC092296.2-201ENST00000589470 999 ntBASIC25.93■■□□□ 1.74
SCUBE3Q8IX30 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC25.92■■□□□ 1.74
SCUBE3Q8IX30 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.92■■□□□ 1.74
SCUBE3Q8IX30 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.92■■□□□ 1.74
SCUBE3Q8IX30 MOB2-207ENST00000614710 705 ntTSL 5 BASIC25.92■■□□□ 1.74
SCUBE3Q8IX30 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
SCUBE3Q8IX30 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.91■■□□□ 1.74
SCUBE3Q8IX30 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms