Protein–RNA interactions for Protein: Q8C0S0

4932411N23Rik, RIKEN cDNA 4932411N23, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4932411N23RikQ8C0S0 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.51■■□□□ 1.19
4932411N23RikQ8C0S0 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
4932411N23RikQ8C0S0 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
4932411N23RikQ8C0S0 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
4932411N23RikQ8C0S0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
4932411N23RikQ8C0S0 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
4932411N23RikQ8C0S0 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
4932411N23RikQ8C0S0 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.48■■□□□ 1.19
4932411N23RikQ8C0S0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
4932411N23RikQ8C0S0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
4932411N23RikQ8C0S0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
4932411N23RikQ8C0S0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
4932411N23RikQ8C0S0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
4932411N23RikQ8C0S0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
4932411N23RikQ8C0S0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.46■■□□□ 1.19
4932411N23RikQ8C0S0 AC153911.1-201ENSMUST00000220378 758 ntBASIC22.46■■□□□ 1.19
4932411N23RikQ8C0S0 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
4932411N23RikQ8C0S0 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
4932411N23RikQ8C0S0 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Gm42699-201ENSMUST00000198104 1657 ntBASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
4932411N23RikQ8C0S0 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
4932411N23RikQ8C0S0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
4932411N23RikQ8C0S0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 Terc-201ENSMUST00000082862 423 ntBASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
4932411N23RikQ8C0S0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
4932411N23RikQ8C0S0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
4932411N23RikQ8C0S0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
4932411N23RikQ8C0S0 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
4932411N23RikQ8C0S0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
4932411N23RikQ8C0S0 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
4932411N23RikQ8C0S0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
4932411N23RikQ8C0S0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
4932411N23RikQ8C0S0 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Scarna2-201ENSMUST00000157560 414 ntBASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
4932411N23RikQ8C0S0 Gm9910-201ENSMUST00000195385 1550 ntBASIC22.33■■□□□ 1.17
4932411N23RikQ8C0S0 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
4932411N23RikQ8C0S0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
4932411N23RikQ8C0S0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
4932411N23RikQ8C0S0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
4932411N23RikQ8C0S0 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
4932411N23RikQ8C0S0 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.32■■□□□ 1.16
4932411N23RikQ8C0S0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
4932411N23RikQ8C0S0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms