Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
VRK2Q86Y07 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
VRK2Q86Y07 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
VRK2Q86Y07 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.83■■□□□ 1.25
VRK2Q86Y07 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
VRK2Q86Y07 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
VRK2Q86Y07 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.83■■□□□ 1.25
VRK2Q86Y07 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.82■■□□□ 1.24
VRK2Q86Y07 AC142472.1-201ENST00000612013 1741 ntBASIC22.82■■□□□ 1.24
VRK2Q86Y07 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.82■■□□□ 1.24
VRK2Q86Y07 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VRK2Q86Y07 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.81■■□□□ 1.24
VRK2Q86Y07 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VRK2Q86Y07 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
VRK2Q86Y07 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
VRK2Q86Y07 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRK2Q86Y07 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRK2Q86Y07 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.8■■□□□ 1.24
VRK2Q86Y07 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.8■■□□□ 1.24
VRK2Q86Y07 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VRK2Q86Y07 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC22.8■■□□□ 1.24
VRK2Q86Y07 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRK2Q86Y07 ABHD17AP4-201ENST00000411545 909 ntBASIC22.79■■□□□ 1.24
VRK2Q86Y07 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.79■■□□□ 1.24
VRK2Q86Y07 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRK2Q86Y07 AC008813.1-201ENST00000536597 885 ntBASIC22.79■■□□□ 1.24
VRK2Q86Y07 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.79■■□□□ 1.24
VRK2Q86Y07 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VRK2Q86Y07 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.79■■□□□ 1.24
VRK2Q86Y07 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.79■■□□□ 1.24
VRK2Q86Y07 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.78■■□□□ 1.24
VRK2Q86Y07 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VRK2Q86Y07 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.78■■□□□ 1.24
VRK2Q86Y07 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VRK2Q86Y07 MIR219A2-201ENST00000608502 1504 ntBASIC22.77■■□□□ 1.24
VRK2Q86Y07 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VRK2Q86Y07 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.77■■□□□ 1.24
VRK2Q86Y07 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRK2Q86Y07 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
VRK2Q86Y07 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRK2Q86Y07 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.77■■□□□ 1.24
VRK2Q86Y07 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
VRK2Q86Y07 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
VRK2Q86Y07 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 HLA-V-202ENST00000446817 847 ntBASIC22.76■■□□□ 1.23
VRK2Q86Y07 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
VRK2Q86Y07 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
VRK2Q86Y07 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VRK2Q86Y07 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VRK2Q86Y07 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VRK2Q86Y07 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.74■■□□□ 1.23
VRK2Q86Y07 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
VRK2Q86Y07 AC145676.1-201ENST00000514988 2004 ntBASIC22.74■■□□□ 1.23
VRK2Q86Y07 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
VRK2Q86Y07 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
VRK2Q86Y07 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
VRK2Q86Y07 CR559946.2-201ENST00000623684 991 ntBASIC22.73■■□□□ 1.23
VRK2Q86Y07 AC148477.6-201ENST00000623746 465 ntBASIC22.73■■□□□ 1.23
VRK2Q86Y07 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VRK2Q86Y07 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
VRK2Q86Y07 AC092803.2-201ENST00000564287 1899 ntBASIC22.73■■□□□ 1.23
VRK2Q86Y07 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
VRK2Q86Y07 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
VRK2Q86Y07 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
VRK2Q86Y07 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
VRK2Q86Y07 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
VRK2Q86Y07 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
VRK2Q86Y07 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22.71■■□□□ 1.23
VRK2Q86Y07 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.71■■□□□ 1.23
VRK2Q86Y07 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC22.71■■□□□ 1.23
VRK2Q86Y07 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
VRK2Q86Y07 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.22
VRK2Q86Y07 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
VRK2Q86Y07 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VRK2Q86Y07 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC22.69■■□□□ 1.22
VRK2Q86Y07 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VRK2Q86Y07 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.69■■□□□ 1.22
VRK2Q86Y07 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VRK2Q86Y07 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC22.69■■□□□ 1.22
VRK2Q86Y07 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
VRK2Q86Y07 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
VRK2Q86Y07 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
VRK2Q86Y07 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
VRK2Q86Y07 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VRK2Q86Y07 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
VRK2Q86Y07 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms