Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 ECEL1P2-201ENST00000461596 1295 ntBASIC24.41■■□□□ 1.5
LRRTM4Q86VH4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LRRTM4Q86VH4 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.4■■□□□ 1.5
LRRTM4Q86VH4 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
LRRTM4Q86VH4 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
LRRTM4Q86VH4 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.37■■□□□ 1.49
LRRTM4Q86VH4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRTM4Q86VH4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
LRRTM4Q86VH4 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC24.37■■□□□ 1.49
LRRTM4Q86VH4 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
LRRTM4Q86VH4 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC24.36■■□□□ 1.49
LRRTM4Q86VH4 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
LRRTM4Q86VH4 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
LRRTM4Q86VH4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC24.36■■□□□ 1.49
LRRTM4Q86VH4 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
LRRTM4Q86VH4 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRTM4Q86VH4 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
LRRTM4Q86VH4 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
LRRTM4Q86VH4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRTM4Q86VH4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.34■■□□□ 1.49
LRRTM4Q86VH4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
LRRTM4Q86VH4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
LRRTM4Q86VH4 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
LRRTM4Q86VH4 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
LRRTM4Q86VH4 REST-210ENST00000638187 1334 ntTSL 5 BASIC24.33■■□□□ 1.48
LRRTM4Q86VH4 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC24.32■■□□□ 1.48
LRRTM4Q86VH4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC24.32■■□□□ 1.48
LRRTM4Q86VH4 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
LRRTM4Q86VH4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC24.31■■□□□ 1.48
LRRTM4Q86VH4 AL449106.1-201ENST00000608517 1980 ntBASIC24.31■■□□□ 1.48
LRRTM4Q86VH4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.31■■□□□ 1.48
LRRTM4Q86VH4 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 ABHD17AP5-201ENST00000580133 923 ntBASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
LRRTM4Q86VH4 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.29■■□□□ 1.48
LRRTM4Q86VH4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
LRRTM4Q86VH4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRRTM4Q86VH4 SMPD5-203ENST00000639008 1464 ntBASIC24.29■■□□□ 1.48
LRRTM4Q86VH4 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
LRRTM4Q86VH4 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
LRRTM4Q86VH4 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
LRRTM4Q86VH4 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRRTM4Q86VH4 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
LRRTM4Q86VH4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC24.27■■□□□ 1.48
LRRTM4Q86VH4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 AL359504.2-201ENST00000605506 1601 ntBASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 AC025884.2-201ENST00000553429 711 ntBASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
LRRTM4Q86VH4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRRTM4Q86VH4 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRTM4Q86VH4 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
LRRTM4Q86VH4 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
LRRTM4Q86VH4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.25■■□□□ 1.47
LRRTM4Q86VH4 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 AC007029.1-201ENST00000604183 313 ntBASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
LRRTM4Q86VH4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.23■■□□□ 1.47
LRRTM4Q86VH4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC24.23■■□□□ 1.47
LRRTM4Q86VH4 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
LRRTM4Q86VH4 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
LRRTM4Q86VH4 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRTM4Q86VH4 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRTM4Q86VH4 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRTM4Q86VH4 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
LRRTM4Q86VH4 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
LRRTM4Q86VH4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.2■■□□□ 1.46
LRRTM4Q86VH4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
LRRTM4Q86VH4 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRRTM4Q86VH4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
LRRTM4Q86VH4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC24.19■■□□□ 1.46
LRRTM4Q86VH4 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
LRRTM4Q86VH4 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.19■■□□□ 1.46
LRRTM4Q86VH4 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
LRRTM4Q86VH4 MIR3960-201ENST00000583311 91 ntBASIC24.18■■□□□ 1.46
LRRTM4Q86VH4 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
LRRTM4Q86VH4 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
LRRTM4Q86VH4 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
LRRTM4Q86VH4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.17■■□□□ 1.46
LRRTM4Q86VH4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.16■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms