Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Upk3bQ80YF6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.95■□□□□ 0.62
Upk3bQ80YF6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Upk3bQ80YF6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Upk3bQ80YF6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Upk3bQ80YF6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Upk3bQ80YF6 Gm37136-201ENSMUST00000194368 194 ntBASIC18.94■□□□□ 0.62
Upk3bQ80YF6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.94■□□□□ 0.62
Upk3bQ80YF6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.94■□□□□ 0.62
Upk3bQ80YF6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Upk3bQ80YF6 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Nkain2-201ENSMUST00000092602 558 ntBASIC18.93■□□□□ 0.62
Upk3bQ80YF6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Upk3bQ80YF6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.92■□□□□ 0.62
Upk3bQ80YF6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Upk3bQ80YF6 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Upk3bQ80YF6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Upk3bQ80YF6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
Upk3bQ80YF6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Upk3bQ80YF6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Upk3bQ80YF6 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
Upk3bQ80YF6 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Upk3bQ80YF6 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Upk3bQ80YF6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.85■□□□□ 0.61
Upk3bQ80YF6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk3bQ80YF6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Upk3bQ80YF6 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Upk3bQ80YF6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC18.83■□□□□ 0.61
Upk3bQ80YF6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Upk3bQ80YF6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk3bQ80YF6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk3bQ80YF6 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Upk3bQ80YF6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Upk3bQ80YF6 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Upk3bQ80YF6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms