Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 AC153911.1-201ENSMUST00000220378 758 ntBASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Gm20634-201ENSMUST00000090779 2956 ntBASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf38bQ80SY5 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.41■■□□□ 1.34
Prpf38bQ80SY5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.4■■□□□ 1.34
Prpf38bQ80SY5 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.4■■□□□ 1.34
Prpf38bQ80SY5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
Prpf38bQ80SY5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Prpf38bQ80SY5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Prpf38bQ80SY5 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.39■■□□□ 1.33
Prpf38bQ80SY5 Gm15820-201ENSMUST00000201566 728 ntBASIC23.39■■□□□ 1.33
Prpf38bQ80SY5 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf38bQ80SY5 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf38bQ80SY5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf38bQ80SY5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf38bQ80SY5 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Prpf38bQ80SY5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Gm5297-201ENSMUST00000198555 1171 ntBASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf38bQ80SY5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf38bQ80SY5 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
Prpf38bQ80SY5 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf38bQ80SY5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Prpf38bQ80SY5 Gm37136-201ENSMUST00000194368 194 ntBASIC23.36■■□□□ 1.33
Prpf38bQ80SY5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf38bQ80SY5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC23.35■■□□□ 1.33
Prpf38bQ80SY5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
Prpf38bQ80SY5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf38bQ80SY5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 Serp2-204ENSMUST00000228055 705 ntBASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf38bQ80SY5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Gm14117-201ENSMUST00000122417 843 ntBASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf38bQ80SY5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Gm43566-201ENSMUST00000196851 808 ntBASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Prpf38bQ80SY5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Prpf38bQ80SY5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
Prpf38bQ80SY5 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf38bQ80SY5 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Prpf38bQ80SY5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Gm9812-201ENSMUST00000061934 968 ntBASIC23.29■■□□□ 1.32
Prpf38bQ80SY5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf38bQ80SY5 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf38bQ80SY5 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Prpf38bQ80SY5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Prpf38bQ80SY5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.27■■□□□ 1.32
Prpf38bQ80SY5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf38bQ80SY5 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.27■■□□□ 1.32
Prpf38bQ80SY5 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.27■■□□□ 1.32
Prpf38bQ80SY5 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Prpf38bQ80SY5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf38bQ80SY5 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.26■■□□□ 1.31
Prpf38bQ80SY5 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf38bQ80SY5 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Prpf38bQ80SY5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf38bQ80SY5 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.25■■□□□ 1.31
Prpf38bQ80SY5 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf38bQ80SY5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Prpf38bQ80SY5 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
Prpf38bQ80SY5 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf38bQ80SY5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf38bQ80SY5 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Prpf38bQ80SY5 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.24■■□□□ 1.31
Prpf38bQ80SY5 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Prpf38bQ80SY5 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms