Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 SLC25A24-204ENST00000569674 2357 ntBASIC13.2□□□□□ -0.3
LCA10Q71F78 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LCA10Q71F78 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LCA10Q71F78 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LCA10Q71F78 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC13.2□□□□□ -0.3
LCA10Q71F78 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LCA10Q71F78 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LCA10Q71F78 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC13.19□□□□□ -0.3
LCA10Q71F78 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LCA10Q71F78 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 AL121603.2-201ENST00000557373 2117 ntBASIC13.18□□□□□ -0.3
LCA10Q71F78 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC13.18□□□□□ -0.3
LCA10Q71F78 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
LCA10Q71F78 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
LCA10Q71F78 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
LCA10Q71F78 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LCA10Q71F78 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LCA10Q71F78 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC13.17□□□□□ -0.3
LCA10Q71F78 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
LCA10Q71F78 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LCA10Q71F78 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.17□□□□□ -0.3
LCA10Q71F78 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
LCA10Q71F78 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC13.16□□□□□ -0.3
LCA10Q71F78 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
LCA10Q71F78 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
LCA10Q71F78 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LCA10Q71F78 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LCA10Q71F78 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.16□□□□□ -0.3
LCA10Q71F78 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC13.16□□□□□ -0.3
LCA10Q71F78 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
LCA10Q71F78 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCA10Q71F78 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
LCA10Q71F78 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCA10Q71F78 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCA10Q71F78 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
LCA10Q71F78 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
LCA10Q71F78 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
LCA10Q71F78 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
LCA10Q71F78 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
LCA10Q71F78 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
LCA10Q71F78 AL135925.1-201ENST00000605920 1701 ntBASIC13.14□□□□□ -0.31
LCA10Q71F78 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC13.14□□□□□ -0.31
LCA10Q71F78 AC068473.5-201ENST00000616428 2072 ntBASIC13.14□□□□□ -0.31
LCA10Q71F78 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
LCA10Q71F78 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCA10Q71F78 AP002365.1-201ENST00000603448 772 ntBASIC13.13□□□□□ -0.31
LCA10Q71F78 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCA10Q71F78 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
LCA10Q71F78 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
LCA10Q71F78 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC13.12□□□□□ -0.31
LCA10Q71F78 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
LCA10Q71F78 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCA10Q71F78 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC13.11□□□□□ -0.31
LCA10Q71F78 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
LCA10Q71F78 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
LCA10Q71F78 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCA10Q71F78 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCA10Q71F78 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
LCA10Q71F78 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
LCA10Q71F78 C9orf163-202ENST00000624034 2573 ntBASIC13.11□□□□□ -0.31
LCA10Q71F78 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC13.1□□□□□ -0.31
LCA10Q71F78 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
LCA10Q71F78 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LCA10Q71F78 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
LCA10Q71F78 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
LCA10Q71F78 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
LCA10Q71F78 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC13.09□□□□□ -0.31
LCA10Q71F78 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LCA10Q71F78 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LCA10Q71F78 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC13.09□□□□□ -0.31
LCA10Q71F78 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
LCA10Q71F78 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
LCA10Q71F78 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
LCA10Q71F78 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
LCA10Q71F78 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.31
LCA10Q71F78 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
LCA10Q71F78 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms