Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.35■■■□□ 2.45
Chd4Q6PDQ2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Chd4Q6PDQ2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
Chd4Q6PDQ2 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Chd4Q6PDQ2 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Gm43566-201ENSMUST00000196851 808 ntBASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Chd4Q6PDQ2 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Chd4Q6PDQ2 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Chd4Q6PDQ2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Chd4Q6PDQ2 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
Chd4Q6PDQ2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC30.28■■■□□ 2.44
Chd4Q6PDQ2 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.28■■■□□ 2.44
Chd4Q6PDQ2 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC30.28■■■□□ 2.44
Chd4Q6PDQ2 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.28■■■□□ 2.44
Chd4Q6PDQ2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC30.27■■■□□ 2.44
Chd4Q6PDQ2 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
Chd4Q6PDQ2 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Chd4Q6PDQ2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC30.27■■■□□ 2.44
Chd4Q6PDQ2 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
Chd4Q6PDQ2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Chd4Q6PDQ2 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Chd4Q6PDQ2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Chd4Q6PDQ2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
Chd4Q6PDQ2 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC30.25■■■□□ 2.43
Chd4Q6PDQ2 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Chd4Q6PDQ2 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Chd4Q6PDQ2 Gm5522-201ENSMUST00000189483 1242 ntBASIC30.24■■■□□ 2.43
Chd4Q6PDQ2 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Chd4Q6PDQ2 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC30.23■■■□□ 2.43
Chd4Q6PDQ2 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC30.23■■■□□ 2.43
Chd4Q6PDQ2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.22■■■□□ 2.43
Chd4Q6PDQ2 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Chd4Q6PDQ2 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
Chd4Q6PDQ2 Gm13238-201ENSMUST00000117655 780 ntBASIC30.22■■■□□ 2.43
Chd4Q6PDQ2 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Chd4Q6PDQ2 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Chd4Q6PDQ2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Chd4Q6PDQ2 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Chd4Q6PDQ2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Chd4Q6PDQ2 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
Chd4Q6PDQ2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Chd4Q6PDQ2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Chd4Q6PDQ2 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC30.18■■■□□ 2.42
Chd4Q6PDQ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Chd4Q6PDQ2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Chd4Q6PDQ2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Chd4Q6PDQ2 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Chd4Q6PDQ2 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
Chd4Q6PDQ2 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
Chd4Q6PDQ2 Gm45444-201ENSMUST00000211394 898 ntBASIC30.16■■■□□ 2.42
Chd4Q6PDQ2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC30.16■■■□□ 2.42
Chd4Q6PDQ2 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Chd4Q6PDQ2 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Chd4Q6PDQ2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Chd4Q6PDQ2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
Chd4Q6PDQ2 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
Chd4Q6PDQ2 Gm22567-201ENSMUST00000175542 342 ntBASIC30.14■■■□□ 2.41
Chd4Q6PDQ2 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Chd4Q6PDQ2 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Chd4Q6PDQ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Chd4Q6PDQ2 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC30.12■■■□□ 2.41
Chd4Q6PDQ2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Chd4Q6PDQ2 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC30.12■■■□□ 2.41
Chd4Q6PDQ2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC30.12■■■□□ 2.41
Chd4Q6PDQ2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Chd4Q6PDQ2 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Chd4Q6PDQ2 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Chd4Q6PDQ2 Gm15546-201ENSMUST00000122095 826 ntBASIC30.1■■■□□ 2.41
Chd4Q6PDQ2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC30.09■■■□□ 2.41
Chd4Q6PDQ2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC30.09■■■□□ 2.41
Chd4Q6PDQ2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Chd4Q6PDQ2 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Chd4Q6PDQ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Chd4Q6PDQ2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC30.06■■■□□ 2.4
Chd4Q6PDQ2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
Chd4Q6PDQ2 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Chd4Q6PDQ2 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Chd4Q6PDQ2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC30.04■■■□□ 2.4
Chd4Q6PDQ2 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC30.03■■■□□ 2.4
Chd4Q6PDQ2 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
Chd4Q6PDQ2 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Chd4Q6PDQ2 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC30.02■■■□□ 2.4
Chd4Q6PDQ2 AC117769.4-201ENSMUST00000225679 685 ntBASIC30.02■■■□□ 2.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms