Protein–RNA interactions for Protein: Q6PDM1

Msl1, Male-specific lethal 1 homolog, mousemouse

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msl1Q6PDM1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Msl1Q6PDM1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Msl1Q6PDM1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Msl1Q6PDM1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Msl1Q6PDM1 Gm37847-201ENSMUST00000192163 1497 ntBASIC28.53■■■□□ 2.16
Msl1Q6PDM1 Gm31748-201ENSMUST00000194938 1497 ntBASIC28.53■■■□□ 2.16
Msl1Q6PDM1 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC28.53■■■□□ 2.16
Msl1Q6PDM1 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Msl1Q6PDM1 Etf1-202ENSMUST00000180351 108 ntBASIC28.51■■■□□ 2.15
Msl1Q6PDM1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC28.51■■■□□ 2.15
Msl1Q6PDM1 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Msl1Q6PDM1 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
Msl1Q6PDM1 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC28.51■■■□□ 2.15
Msl1Q6PDM1 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Msl1Q6PDM1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Msl1Q6PDM1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
Msl1Q6PDM1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC28.49■■■□□ 2.15
Msl1Q6PDM1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.15
Msl1Q6PDM1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC28.48■■■□□ 2.15
Msl1Q6PDM1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Msl1Q6PDM1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Msl1Q6PDM1 Serp2-204ENSMUST00000228055 705 ntBASIC28.47■■■□□ 2.15
Msl1Q6PDM1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Msl1Q6PDM1 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Msl1Q6PDM1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Msl1Q6PDM1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Gm43445-201ENSMUST00000198564 2091 ntBASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC28.44■■■□□ 2.14
Msl1Q6PDM1 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Msl1Q6PDM1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Msl1Q6PDM1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Msl1Q6PDM1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Msl1Q6PDM1 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Msl1Q6PDM1 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Msl1Q6PDM1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Msl1Q6PDM1 AC117769.4-201ENSMUST00000225679 685 ntBASIC28.41■■■□□ 2.14
Msl1Q6PDM1 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Msl1Q6PDM1 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.41■■■□□ 2.14
Msl1Q6PDM1 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Msl1Q6PDM1 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
Msl1Q6PDM1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC28.39■■■□□ 2.14
Msl1Q6PDM1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC28.38■■■□□ 2.13
Msl1Q6PDM1 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Msl1Q6PDM1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Msl1Q6PDM1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Msl1Q6PDM1 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC28.37■■■□□ 2.13
Msl1Q6PDM1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Msl1Q6PDM1 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Msl1Q6PDM1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Msl1Q6PDM1 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Msl1Q6PDM1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Msl1Q6PDM1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC28.35■■■□□ 2.13
Msl1Q6PDM1 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Msl1Q6PDM1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Msl1Q6PDM1 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Msl1Q6PDM1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Msl1Q6PDM1 Gm10232-201ENSMUST00000089221 720 ntBASIC28.34■■■□□ 2.13
Msl1Q6PDM1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Msl1Q6PDM1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC28.34■■■□□ 2.13
Msl1Q6PDM1 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Msl1Q6PDM1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Msl1Q6PDM1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
Msl1Q6PDM1 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Msl1Q6PDM1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Msl1Q6PDM1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.12
Msl1Q6PDM1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC28.32■■■□□ 2.12
Msl1Q6PDM1 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC28.32■■■□□ 2.12
Msl1Q6PDM1 Zxda-201ENSMUST00000117281 2621 ntBASIC28.32■■■□□ 2.12
Msl1Q6PDM1 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Msl1Q6PDM1 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Msl1Q6PDM1 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC28.31■■■□□ 2.12
Msl1Q6PDM1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC28.3■■■□□ 2.12
Msl1Q6PDM1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Msl1Q6PDM1 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Msl1Q6PDM1 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC28.29■■■□□ 2.12
Msl1Q6PDM1 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC28.29■■■□□ 2.12
Msl1Q6PDM1 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Msl1Q6PDM1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Msl1Q6PDM1 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC28.28■■■□□ 2.12
Msl1Q6PDM1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC28.28■■■□□ 2.12
Msl1Q6PDM1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC28.28■■■□□ 2.12
Msl1Q6PDM1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Msl1Q6PDM1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Msl1Q6PDM1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Msl1Q6PDM1 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.25■■■□□ 2.11
Msl1Q6PDM1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms