Protein–RNA interactions for Protein: Q6NZL8

Scube1, Signal peptide, CUB and EGF-like domain-containing protein 1, mousemouse

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube1Q6NZL8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Scube1Q6NZL8 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Scube1Q6NZL8 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Scube1Q6NZL8 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Scube1Q6NZL8 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.58■■□□□ 1.05
Scube1Q6NZL8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Scube1Q6NZL8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Scube1Q6NZL8 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.57■■□□□ 1.04
Scube1Q6NZL8 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Scube1Q6NZL8 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scube1Q6NZL8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scube1Q6NZL8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Scube1Q6NZL8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Scube1Q6NZL8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.55■■□□□ 1.04
Scube1Q6NZL8 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Scube1Q6NZL8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scube1Q6NZL8 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scube1Q6NZL8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scube1Q6NZL8 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scube1Q6NZL8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
Scube1Q6NZL8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scube1Q6NZL8 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scube1Q6NZL8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scube1Q6NZL8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scube1Q6NZL8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.51■■□□□ 1.03
Scube1Q6NZL8 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scube1Q6NZL8 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
Scube1Q6NZL8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scube1Q6NZL8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scube1Q6NZL8 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Scube1Q6NZL8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scube1Q6NZL8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scube1Q6NZL8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube1Q6NZL8 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.48■■□□□ 1.03
Scube1Q6NZL8 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scube1Q6NZL8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scube1Q6NZL8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.48■■□□□ 1.03
Scube1Q6NZL8 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube1Q6NZL8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube1Q6NZL8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube1Q6NZL8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Scube1Q6NZL8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scube1Q6NZL8 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scube1Q6NZL8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Scube1Q6NZL8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
Scube1Q6NZL8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
Scube1Q6NZL8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.45■■□□□ 1.02
Scube1Q6NZL8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.45■■□□□ 1.02
Scube1Q6NZL8 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube1Q6NZL8 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube1Q6NZL8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Scube1Q6NZL8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube1Q6NZL8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scube1Q6NZL8 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube1Q6NZL8 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube1Q6NZL8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube1Q6NZL8 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Scube1Q6NZL8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Scube1Q6NZL8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube1Q6NZL8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube1Q6NZL8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube1Q6NZL8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scube1Q6NZL8 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Scube1Q6NZL8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scube1Q6NZL8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scube1Q6NZL8 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Scube1Q6NZL8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scube1Q6NZL8 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Scube1Q6NZL8 Particl-201ENSMUST00000205370 1560 ntBASIC21.38■■□□□ 1.01
Scube1Q6NZL8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Scube1Q6NZL8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms