Protein–RNA interactions for Protein: Q62193

Rpa2, Replication protein A 32 kDa subunit, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa2Q62193 Terc-201ENSMUST00000082862 423 ntBASIC20.58■□□□□ 0.89
Rpa2Q62193 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rpa2Q62193 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rpa2Q62193 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.58■□□□□ 0.88
Rpa2Q62193 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.57■□□□□ 0.88
Rpa2Q62193 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa2Q62193 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa2Q62193 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rpa2Q62193 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
Rpa2Q62193 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.56■□□□□ 0.88
Rpa2Q62193 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa2Q62193 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa2Q62193 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa2Q62193 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rpa2Q62193 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC20.55■□□□□ 0.88
Rpa2Q62193 Gm11687-201ENSMUST00000118911 886 ntBASIC20.55■□□□□ 0.88
Rpa2Q62193 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rpa2Q62193 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa2Q62193 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa2Q62193 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa2Q62193 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Rpa2Q62193 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Rpa2Q62193 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpa2Q62193 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpa2Q62193 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Rpa2Q62193 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Rpa2Q62193 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Rpa2Q62193 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.51■□□□□ 0.87
Rpa2Q62193 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Rpa2Q62193 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Rpa2Q62193 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa2Q62193 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Rpa2Q62193 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa2Q62193 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Rpa2Q62193 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Rpa2Q62193 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Rpa2Q62193 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpa2Q62193 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.48■□□□□ 0.87
Rpa2Q62193 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Rpa2Q62193 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpa2Q62193 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Rpa2Q62193 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rpa2Q62193 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.47■□□□□ 0.87
Rpa2Q62193 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.47■□□□□ 0.87
Rpa2Q62193 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa2Q62193 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa2Q62193 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa2Q62193 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Rpa2Q62193 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rpa2Q62193 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.46■□□□□ 0.87
Rpa2Q62193 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa2Q62193 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa2Q62193 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa2Q62193 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rpa2Q62193 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rpa2Q62193 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rpa2Q62193 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rpa2Q62193 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rpa2Q62193 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa2Q62193 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa2Q62193 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rpa2Q62193 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa2Q62193 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.42■□□□□ 0.86
Rpa2Q62193 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa2Q62193 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rpa2Q62193 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.41■□□□□ 0.86
Rpa2Q62193 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rpa2Q62193 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.4■□□□□ 0.86
Rpa2Q62193 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Rpa2Q62193 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.4■□□□□ 0.86
Rpa2Q62193 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rpa2Q62193 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rpa2Q62193 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa2Q62193 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa2Q62193 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa2Q62193 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Rpa2Q62193 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rpa2Q62193 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.39■□□□□ 0.86
Rpa2Q62193 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa2Q62193 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa2Q62193 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rpa2Q62193 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms