Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Clns1aQ61189 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Clns1aQ61189 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clns1aQ61189 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Clns1aQ61189 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clns1aQ61189 Gm30023-201ENSMUST00000197970 889 ntBASIC19.22■□□□□ 0.67
Clns1aQ61189 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clns1aQ61189 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clns1aQ61189 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Clns1aQ61189 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.21■□□□□ 0.67
Clns1aQ61189 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clns1aQ61189 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clns1aQ61189 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clns1aQ61189 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clns1aQ61189 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clns1aQ61189 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Clns1aQ61189 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clns1aQ61189 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clns1aQ61189 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Clns1aQ61189 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Clns1aQ61189 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clns1aQ61189 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Clns1aQ61189 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clns1aQ61189 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.18■□□□□ 0.66
Clns1aQ61189 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Clns1aQ61189 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Clns1aQ61189 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC19.18■□□□□ 0.66
Clns1aQ61189 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clns1aQ61189 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clns1aQ61189 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Clns1aQ61189 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clns1aQ61189 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Clns1aQ61189 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.16■□□□□ 0.66
Clns1aQ61189 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clns1aQ61189 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clns1aQ61189 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Clns1aQ61189 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.14■□□□□ 0.65
Clns1aQ61189 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clns1aQ61189 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clns1aQ61189 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clns1aQ61189 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clns1aQ61189 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clns1aQ61189 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clns1aQ61189 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clns1aQ61189 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clns1aQ61189 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Clns1aQ61189 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clns1aQ61189 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Clns1aQ61189 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC19.11■□□□□ 0.65
Clns1aQ61189 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.11■□□□□ 0.65
Clns1aQ61189 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clns1aQ61189 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clns1aQ61189 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clns1aQ61189 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clns1aQ61189 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clns1aQ61189 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clns1aQ61189 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clns1aQ61189 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Clns1aQ61189 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clns1aQ61189 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clns1aQ61189 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clns1aQ61189 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Clns1aQ61189 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clns1aQ61189 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clns1aQ61189 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Clns1aQ61189 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clns1aQ61189 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clns1aQ61189 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clns1aQ61189 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clns1aQ61189 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clns1aQ61189 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clns1aQ61189 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clns1aQ61189 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clns1aQ61189 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC19.05■□□□□ 0.64
Clns1aQ61189 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.05■□□□□ 0.64
Clns1aQ61189 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clns1aQ61189 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms