Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scnn1aQ61180 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Scnn1aQ61180 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scnn1aQ61180 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC26.32■■□□□ 1.8
Scnn1aQ61180 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
Scnn1aQ61180 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scnn1aQ61180 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scnn1aQ61180 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC26.31■■□□□ 1.8
Scnn1aQ61180 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scnn1aQ61180 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC26.3■■□□□ 1.8
Scnn1aQ61180 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
Scnn1aQ61180 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scnn1aQ61180 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC26.29■■□□□ 1.8
Scnn1aQ61180 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Scnn1aQ61180 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
Scnn1aQ61180 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Scnn1aQ61180 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scnn1aQ61180 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Scnn1aQ61180 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Scnn1aQ61180 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Scnn1aQ61180 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scnn1aQ61180 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Scnn1aQ61180 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scnn1aQ61180 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC26.25■■□□□ 1.79
Scnn1aQ61180 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Scnn1aQ61180 AC117769.4-201ENSMUST00000225679 685 ntBASIC26.24■■□□□ 1.79
Scnn1aQ61180 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Scnn1aQ61180 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scnn1aQ61180 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scnn1aQ61180 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Scnn1aQ61180 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.21■■□□□ 1.79
Scnn1aQ61180 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Scnn1aQ61180 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Scnn1aQ61180 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Scnn1aQ61180 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Scnn1aQ61180 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.19■■□□□ 1.78
Scnn1aQ61180 Gm5921-201ENSMUST00000075898 882 ntBASIC26.19■■□□□ 1.78
Scnn1aQ61180 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scnn1aQ61180 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Scnn1aQ61180 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC26.17■■□□□ 1.78
Scnn1aQ61180 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scnn1aQ61180 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scnn1aQ61180 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Scnn1aQ61180 AC164433.2-201ENSMUST00000226346 1701 ntBASIC26.16■■□□□ 1.78
Scnn1aQ61180 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scnn1aQ61180 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scnn1aQ61180 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Scnn1aQ61180 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scnn1aQ61180 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Scnn1aQ61180 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.77
Scnn1aQ61180 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Scnn1aQ61180 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Gm43592-201ENSMUST00000196922 1165 ntBASIC26.12■■□□□ 1.77
Scnn1aQ61180 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scnn1aQ61180 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Scnn1aQ61180 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scnn1aQ61180 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Scnn1aQ61180 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scnn1aQ61180 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.1■■□□□ 1.77
Scnn1aQ61180 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scnn1aQ61180 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scnn1aQ61180 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scnn1aQ61180 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scnn1aQ61180 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Scnn1aQ61180 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC26.09■■□□□ 1.77
Scnn1aQ61180 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Scnn1aQ61180 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scnn1aQ61180 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Scnn1aQ61180 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scnn1aQ61180 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC26.06■■□□□ 1.76
Scnn1aQ61180 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scnn1aQ61180 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Scnn1aQ61180 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms