Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scarb1Q61009 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scarb1Q61009 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC18.89■□□□□ 0.61
Scarb1Q61009 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scarb1Q61009 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scarb1Q61009 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scarb1Q61009 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Scarb1Q61009 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.88■□□□□ 0.61
Scarb1Q61009 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scarb1Q61009 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Scarb1Q61009 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scarb1Q61009 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
Scarb1Q61009 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.87■□□□□ 0.61
Scarb1Q61009 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.87■□□□□ 0.61
Scarb1Q61009 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scarb1Q61009 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Scarb1Q61009 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scarb1Q61009 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarb1Q61009 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scarb1Q61009 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Scarb1Q61009 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scarb1Q61009 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Scarb1Q61009 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scarb1Q61009 Tdp2-203ENSMUST00000223804 1136 ntBASIC18.84■□□□□ 0.61
Scarb1Q61009 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Scarb1Q61009 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.61
Scarb1Q61009 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scarb1Q61009 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scarb1Q61009 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarb1Q61009 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scarb1Q61009 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scarb1Q61009 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarb1Q61009 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarb1Q61009 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarb1Q61009 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.82■□□□□ 0.6
Scarb1Q61009 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarb1Q61009 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scarb1Q61009 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarb1Q61009 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.81■□□□□ 0.6
Scarb1Q61009 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarb1Q61009 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scarb1Q61009 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scarb1Q61009 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Scarb1Q61009 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Scarb1Q61009 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scarb1Q61009 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Scarb1Q61009 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Scarb1Q61009 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.79■□□□□ 0.6
Scarb1Q61009 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.79■□□□□ 0.6
Scarb1Q61009 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scarb1Q61009 Gm14121-201ENSMUST00000121441 1380 ntBASIC18.78■□□□□ 0.6
Scarb1Q61009 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Scarb1Q61009 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scarb1Q61009 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarb1Q61009 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scarb1Q61009 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scarb1Q61009 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scarb1Q61009 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.76■□□□□ 0.59
Scarb1Q61009 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scarb1Q61009 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarb1Q61009 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scarb1Q61009 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.76■□□□□ 0.59
Scarb1Q61009 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC18.75■□□□□ 0.59
Scarb1Q61009 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scarb1Q61009 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Scarb1Q61009 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarb1Q61009 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarb1Q61009 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarb1Q61009 Gm45855-201ENSMUST00000212546 880 ntBASIC18.74■□□□□ 0.59
Scarb1Q61009 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarb1Q61009 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scarb1Q61009 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms