Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.1■■□□□ 1.13
LRRK2Q5S007 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
LRRK2Q5S007 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
LRRK2Q5S007 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.1■■□□□ 1.13
LRRK2Q5S007 KRT125P-201ENST00000546827 989 ntBASIC22.1■■□□□ 1.13
LRRK2Q5S007 GRAMD4P7-201ENST00000578182 1232 ntBASIC22.1■■□□□ 1.13
LRRK2Q5S007 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.1■■□□□ 1.13
LRRK2Q5S007 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
LRRK2Q5S007 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.09■■□□□ 1.13
LRRK2Q5S007 AL139246.5-201ENST00000606645 996 ntBASIC22.09■■□□□ 1.13
LRRK2Q5S007 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
LRRK2Q5S007 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
LRRK2Q5S007 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.08■■□□□ 1.13
LRRK2Q5S007 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
LRRK2Q5S007 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
LRRK2Q5S007 AC092666.2-201ENST00000613287 246 ntBASIC22.08■■□□□ 1.12
LRRK2Q5S007 CREM-229ENST00000474362 1030 ntTSL 2 BASIC22.07■■□□□ 1.12
LRRK2Q5S007 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
LRRK2Q5S007 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
LRRK2Q5S007 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 AC131281.2-201ENST00000520478 145 ntBASIC22.06■■□□□ 1.12
LRRK2Q5S007 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.06■■□□□ 1.12
LRRK2Q5S007 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRK2Q5S007 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.05■■□□□ 1.12
LRRK2Q5S007 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
LRRK2Q5S007 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRK2Q5S007 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
LRRK2Q5S007 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.04■■□□□ 1.12
LRRK2Q5S007 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRK2Q5S007 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC22.03■■□□□ 1.12
LRRK2Q5S007 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC22.03■■□□□ 1.12
LRRK2Q5S007 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
LRRK2Q5S007 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRK2Q5S007 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRK2Q5S007 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.03■■□□□ 1.12
LRRK2Q5S007 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
LRRK2Q5S007 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC22.02■■□□□ 1.12
LRRK2Q5S007 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRK2Q5S007 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
LRRK2Q5S007 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.02■■□□□ 1.11
LRRK2Q5S007 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.01■■□□□ 1.11
LRRK2Q5S007 AC018755.3-202ENST00000596210 929 ntBASIC22.01■■□□□ 1.11
LRRK2Q5S007 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.01■■□□□ 1.11
LRRK2Q5S007 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
LRRK2Q5S007 AC110285.6-201ENST00000617652 491 ntBASIC22.01■■□□□ 1.11
LRRK2Q5S007 NALT1-201ENST00000429224 738 ntTSL 5 BASIC22■■□□□ 1.11
LRRK2Q5S007 MTX2-204ENST00000443241 799 ntTSL 3 BASIC22■■□□□ 1.11
LRRK2Q5S007 MIR4787-201ENST00000607364 84 ntBASIC22■■□□□ 1.11
LRRK2Q5S007 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
LRRK2Q5S007 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22■■□□□ 1.11
LRRK2Q5S007 AC026271.2-201ENST00000428091 497 ntBASIC22■■□□□ 1.11
LRRK2Q5S007 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22■■□□□ 1.11
LRRK2Q5S007 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRK2Q5S007 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRK2Q5S007 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRK2Q5S007 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.99■■□□□ 1.11
LRRK2Q5S007 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
LRRK2Q5S007 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRK2Q5S007 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
LRRK2Q5S007 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.99■■□□□ 1.11
LRRK2Q5S007 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRK2Q5S007 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.98■■□□□ 1.11
LRRK2Q5S007 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
LRRK2Q5S007 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
LRRK2Q5S007 AC005837.3-201ENST00000612163 286 ntBASIC21.98■■□□□ 1.11
LRRK2Q5S007 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
LRRK2Q5S007 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
LRRK2Q5S007 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.97■■□□□ 1.11
LRRK2Q5S007 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
LRRK2Q5S007 AC019171.1-201ENST00000601251 1056 ntBASIC21.97■■□□□ 1.11
LRRK2Q5S007 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRK2Q5S007 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
LRRK2Q5S007 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
LRRK2Q5S007 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC21.96■■□□□ 1.11
LRRK2Q5S007 UNC93B8-201ENST00000511903 705 ntBASIC21.96■■□□□ 1.11
LRRK2Q5S007 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK2Q5S007 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK2Q5S007 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.95■■□□□ 1.1
LRRK2Q5S007 LONRF2P2-201ENST00000439212 571 ntBASIC21.95■■□□□ 1.1
LRRK2Q5S007 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRRK2Q5S007 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK2Q5S007 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK2Q5S007 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
LRRK2Q5S007 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
LRRK2Q5S007 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
LRRK2Q5S007 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
LRRK2Q5S007 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
LRRK2Q5S007 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.94■■□□□ 1.1
LRRK2Q5S007 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms