Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 AL359258.2-201ENST00000564063 1566 ntBASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
RSPO4Q2I0M5 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.45■■□□□ 1.5
RSPO4Q2I0M5 TK2-216ENST00000564917 1156 ntTSL 3 BASIC24.45■■□□□ 1.5
RSPO4Q2I0M5 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC24.44■■□□□ 1.5
RSPO4Q2I0M5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
RSPO4Q2I0M5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
RSPO4Q2I0M5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.44■■□□□ 1.5
RSPO4Q2I0M5 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RSPO4Q2I0M5 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RSPO4Q2I0M5 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
RSPO4Q2I0M5 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RSPO4Q2I0M5 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
RSPO4Q2I0M5 IDNK-203ENST00000405990 629 ntTSL 2 BASIC24.41■■□□□ 1.5
RSPO4Q2I0M5 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC24.41■■□□□ 1.5
RSPO4Q2I0M5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.41■■□□□ 1.5
RSPO4Q2I0M5 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RSPO4Q2I0M5 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.5
RSPO4Q2I0M5 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.39■■□□□ 1.5
RSPO4Q2I0M5 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC24.39■■□□□ 1.49
RSPO4Q2I0M5 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC24.39■■□□□ 1.49
RSPO4Q2I0M5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.39■■□□□ 1.49
RSPO4Q2I0M5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RSPO4Q2I0M5 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC24.38■■□□□ 1.49
RSPO4Q2I0M5 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RSPO4Q2I0M5 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC24.37■■□□□ 1.49
RSPO4Q2I0M5 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 KRT125P-201ENST00000546827 989 ntBASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 MEST-211ENST00000437945 1455 ntTSL 5 BASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
RSPO4Q2I0M5 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC24.35■■□□□ 1.49
RSPO4Q2I0M5 LONRF2P2-201ENST00000439212 571 ntBASIC24.35■■□□□ 1.49
RSPO4Q2I0M5 MIR3960-201ENST00000583311 91 ntBASIC24.35■■□□□ 1.49
RSPO4Q2I0M5 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
RSPO4Q2I0M5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 KRT16P3-201ENST00000439127 1283 ntBASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 MIR4787-201ENST00000607364 84 ntBASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC24.34■■□□□ 1.49
RSPO4Q2I0M5 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24.33■■□□□ 1.49
RSPO4Q2I0M5 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
RSPO4Q2I0M5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 UNC93B8-201ENST00000511903 705 ntBASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC24.32■■□□□ 1.48
RSPO4Q2I0M5 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.31■■□□□ 1.48
RSPO4Q2I0M5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
RSPO4Q2I0M5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.31■■□□□ 1.48
RSPO4Q2I0M5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RSPO4Q2I0M5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC24.29■■□□□ 1.48
RSPO4Q2I0M5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 AC019171.1-201ENST00000601251 1056 ntBASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 AC005837.3-201ENST00000612163 286 ntBASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
RSPO4Q2I0M5 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms