Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Chd8Q09XV5 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
Chd8Q09XV5 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Chd8Q09XV5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Chd8Q09XV5 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Chd8Q09XV5 Gm27011-201ENSMUST00000182352 972 ntBASIC21.18■□□□□ 0.98
Chd8Q09XV5 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.17■□□□□ 0.98
Chd8Q09XV5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Chd8Q09XV5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.16■□□□□ 0.98
Chd8Q09XV5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd8Q09XV5 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd8Q09XV5 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Chd8Q09XV5 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.15■□□□□ 0.98
Chd8Q09XV5 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Chd8Q09XV5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Chd8Q09XV5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.15■□□□□ 0.98
Chd8Q09XV5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.14■□□□□ 0.98
Chd8Q09XV5 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Chd8Q09XV5 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Chd8Q09XV5 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC21.14■□□□□ 0.97
Chd8Q09XV5 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
Chd8Q09XV5 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Chd8Q09XV5 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd8Q09XV5 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Chd8Q09XV5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Chd8Q09XV5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Chd8Q09XV5 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.11■□□□□ 0.97
Chd8Q09XV5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd8Q09XV5 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.1■□□□□ 0.97
Chd8Q09XV5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Chd8Q09XV5 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC21.1■□□□□ 0.97
Chd8Q09XV5 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Chd8Q09XV5 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Gm45417-201ENSMUST00000209533 758 ntBASIC21.09■□□□□ 0.97
Chd8Q09XV5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Chd8Q09XV5 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Chd8Q09XV5 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Chd8Q09XV5 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.08■□□□□ 0.96
Chd8Q09XV5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Chd8Q09XV5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Chd8Q09XV5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd8Q09XV5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Chd8Q09XV5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Chd8Q09XV5 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
Chd8Q09XV5 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.06■□□□□ 0.96
Chd8Q09XV5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chd8Q09XV5 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Chd8Q09XV5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Chd8Q09XV5 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.05■□□□□ 0.96
Chd8Q09XV5 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd8Q09XV5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Chd8Q09XV5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd8Q09XV5 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd8Q09XV5 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Chd8Q09XV5 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd8Q09XV5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Chd8Q09XV5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd8Q09XV5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd8Q09XV5 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Chd8Q09XV5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Chd8Q09XV5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Chd8Q09XV5 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Chd8Q09XV5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd8Q09XV5 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.01■□□□□ 0.95
Chd8Q09XV5 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.01■□□□□ 0.95
Chd8Q09XV5 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Chd8Q09XV5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.01■□□□□ 0.95
Chd8Q09XV5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Chd8Q09XV5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Chd8Q09XV5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.99■□□□□ 0.95
Chd8Q09XV5 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Chd8Q09XV5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.98■□□□□ 0.95
Chd8Q09XV5 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Chd8Q09XV5 Terc-201ENSMUST00000082862 423 ntBASIC20.98■□□□□ 0.95
Chd8Q09XV5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Chd8Q09XV5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd8Q09XV5 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Chd8Q09XV5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms