Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Hmgb1P63158 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.65■■□□□ 1.54
Hmgb1P63158 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.65■■□□□ 1.54
Hmgb1P63158 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Hmgb1P63158 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgb1P63158 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
Hmgb1P63158 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Hmgb1P63158 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Hmgb1P63158 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC24.63■■□□□ 1.53
Hmgb1P63158 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.63■■□□□ 1.53
Hmgb1P63158 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Hmgb1P63158 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hmgb1P63158 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Hmgb1P63158 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Hmgb1P63158 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Hmgb1P63158 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Gm7432-201ENSMUST00000210343 879 ntBASIC24.6■■□□□ 1.53
Hmgb1P63158 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.6■■□□□ 1.53
Hmgb1P63158 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Hmgb1P63158 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Hmgb1P63158 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
Hmgb1P63158 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Hmgb1P63158 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC24.58■■□□□ 1.53
Hmgb1P63158 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.58■■□□□ 1.53
Hmgb1P63158 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Hmgb1P63158 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC24.57■■□□□ 1.52
Hmgb1P63158 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Hmgb1P63158 Gm9812-201ENSMUST00000061934 968 ntBASIC24.57■■□□□ 1.52
Hmgb1P63158 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgb1P63158 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
Hmgb1P63158 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC24.56■■□□□ 1.52
Hmgb1P63158 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Hmgb1P63158 H3f3aos-201ENSMUST00000097448 2905 ntBASIC24.55■■□□□ 1.52
Hmgb1P63158 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
Hmgb1P63158 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
Hmgb1P63158 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC24.55■■□□□ 1.52
Hmgb1P63158 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Hmgb1P63158 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Hmgb1P63158 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
Hmgb1P63158 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgb1P63158 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Hmgb1P63158 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Hmgb1P63158 Mir3960-201ENSMUST00000198213 73 ntBASIC24.52■■□□□ 1.52
Hmgb1P63158 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
Hmgb1P63158 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Hmgb1P63158 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Hmgb1P63158 AC153911.1-201ENSMUST00000220378 758 ntBASIC24.51■■□□□ 1.51
Hmgb1P63158 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
Hmgb1P63158 AC154454.1-201ENSMUST00000225253 216 ntBASIC24.5■■□□□ 1.51
Hmgb1P63158 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Gm12818-201ENSMUST00000117562 1349 ntBASIC24.5■■□□□ 1.51
Hmgb1P63158 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Hmgb1P63158 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC24.5■■□□□ 1.51
Hmgb1P63158 Gm11599-201ENSMUST00000118720 878 ntBASIC24.49■■□□□ 1.51
Hmgb1P63158 AC122317.2-201ENSMUST00000218708 1248 ntBASIC24.49■■□□□ 1.51
Hmgb1P63158 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgb1P63158 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Hmgb1P63158 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.48■■□□□ 1.51
Hmgb1P63158 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Hmgb1P63158 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Hmgb1P63158 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Hmgb1P63158 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Hmgb1P63158 AC164433.2-201ENSMUST00000226346 1701 ntBASIC24.46■■□□□ 1.51
Hmgb1P63158 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.45■■□□□ 1.51
Hmgb1P63158 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC24.45■■□□□ 1.51
Hmgb1P63158 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgb1P63158 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
Hmgb1P63158 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms