Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Sec61a1P61620 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Sec61a1P61620 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Sec61a1P61620 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Sec61a1P61620 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a1P61620 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a1P61620 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.63■□□□□ 0.73
Sec61a1P61620 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a1P61620 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Sec61a1P61620 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Sec61a1P61620 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Sec61a1P61620 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Sec61a1P61620 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Sec61a1P61620 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sec61a1P61620 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.61■□□□□ 0.73
Sec61a1P61620 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Sec61a1P61620 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a1P61620 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a1P61620 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Sec61a1P61620 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a1P61620 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a1P61620 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Sec61a1P61620 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Sec61a1P61620 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Sec61a1P61620 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Sec61a1P61620 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Sec61a1P61620 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.72
Sec61a1P61620 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Sec61a1P61620 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.58■□□□□ 0.72
Sec61a1P61620 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sec61a1P61620 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a1P61620 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Sec61a1P61620 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.57■□□□□ 0.72
Sec61a1P61620 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a1P61620 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
Sec61a1P61620 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a1P61620 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Sec61a1P61620 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a1P61620 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Sec61a1P61620 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.56■□□□□ 0.72
Sec61a1P61620 Particl-201ENSMUST00000205370 1560 ntBASIC19.56■□□□□ 0.72
Sec61a1P61620 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a1P61620 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a1P61620 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a1P61620 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Sec61a1P61620 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Sec61a1P61620 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Sec61a1P61620 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Sec61a1P61620 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a1P61620 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a1P61620 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a1P61620 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.53■□□□□ 0.72
Sec61a1P61620 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a1P61620 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Sec61a1P61620 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Sec61a1P61620 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Sec61a1P61620 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sec61a1P61620 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Sec61a1P61620 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a1P61620 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
Sec61a1P61620 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a1P61620 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a1P61620 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a1P61620 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Sec61a1P61620 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Sec61a1P61620 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Sec61a1P61620 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sec61a1P61620 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Sec61a1P61620 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec61a1P61620 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.48■□□□□ 0.71
Sec61a1P61620 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a1P61620 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a1P61620 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec61a1P61620 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.47■□□□□ 0.71
Sec61a1P61620 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec61a1P61620 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.46■□□□□ 0.71
Sec61a1P61620 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec61a1P61620 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.45■□□□□ 0.7
Sec61a1P61620 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec61a1P61620 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.45■□□□□ 0.7
Sec61a1P61620 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec61a1P61620 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms