Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2D3P61077 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2D3P61077 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.49■□□□□ 0.39
UBE2D3P61077 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
UBE2D3P61077 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2D3P61077 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
UBE2D3P61077 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC17.48■□□□□ 0.39
UBE2D3P61077 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
UBE2D3P61077 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2D3P61077 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2D3P61077 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
UBE2D3P61077 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2D3P61077 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2D3P61077 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2D3P61077 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC17.47■□□□□ 0.39
UBE2D3P61077 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
UBE2D3P61077 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2D3P61077 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
UBE2D3P61077 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.46■□□□□ 0.39
UBE2D3P61077 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2D3P61077 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2D3P61077 SP8-202ENST00000418710 1618 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2D3P61077 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.45■□□□□ 0.38
UBE2D3P61077 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
UBE2D3P61077 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC17.44■□□□□ 0.38
UBE2D3P61077 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC17.44■□□□□ 0.38
UBE2D3P61077 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
UBE2D3P61077 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D3P61077 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBE2D3P61077 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBE2D3P61077 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBE2D3P61077 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2D3P61077 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBE2D3P61077 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.42■□□□□ 0.38
UBE2D3P61077 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC17.42■□□□□ 0.38
UBE2D3P61077 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC17.42■□□□□ 0.38
UBE2D3P61077 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2D3P61077 AC091060.1-201ENST00000623524 1766 ntBASIC17.41■□□□□ 0.38
UBE2D3P61077 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.41■□□□□ 0.38
UBE2D3P61077 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2D3P61077 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBE2D3P61077 AP004609.3-201ENST00000610705 1884 ntBASIC17.41■□□□□ 0.38
UBE2D3P61077 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC17.41■□□□□ 0.38
UBE2D3P61077 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.4■□□□□ 0.38
UBE2D3P61077 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2D3P61077 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBE2D3P61077 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
UBE2D3P61077 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2D3P61077 RPS2-210ENST00000530225 765 ntTSL 2 BASIC17.39■□□□□ 0.37
UBE2D3P61077 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.39■□□□□ 0.37
UBE2D3P61077 WHAMMP3-201ENST00000611636 1609 ntBASIC17.39■□□□□ 0.37
UBE2D3P61077 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2D3P61077 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
UBE2D3P61077 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D3P61077 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D3P61077 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
UBE2D3P61077 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.38■□□□□ 0.37
UBE2D3P61077 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D3P61077 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
UBE2D3P61077 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.37■□□□□ 0.37
UBE2D3P61077 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2D3P61077 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
UBE2D3P61077 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2D3P61077 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.37■□□□□ 0.37
UBE2D3P61077 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
UBE2D3P61077 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D3P61077 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D3P61077 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
UBE2D3P61077 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
UBE2D3P61077 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2D3P61077 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.36■□□□□ 0.37
UBE2D3P61077 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.36■□□□□ 0.37
UBE2D3P61077 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
UBE2D3P61077 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
UBE2D3P61077 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC17.36■□□□□ 0.37
UBE2D3P61077 AC142472.1-201ENST00000612013 1741 ntBASIC17.35■□□□□ 0.37
UBE2D3P61077 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2D3P61077 AC145676.1-201ENST00000514988 2004 ntBASIC17.35■□□□□ 0.37
UBE2D3P61077 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.35■□□□□ 0.37
UBE2D3P61077 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2D3P61077 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
UBE2D3P61077 AC020928.2-201ENST00000588717 2197 ntBASIC17.35■□□□□ 0.37
UBE2D3P61077 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2D3P61077 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
UBE2D3P61077 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC17.34■□□□□ 0.37
UBE2D3P61077 RPS2P35-201ENST00000443417 897 ntBASIC17.34■□□□□ 0.37
UBE2D3P61077 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC17.34■□□□□ 0.37
UBE2D3P61077 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2D3P61077 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
UBE2D3P61077 LINC01971-201ENST00000617888 1048 ntBASIC17.34■□□□□ 0.37
UBE2D3P61077 CHML-204ENST00000638121 920 ntTSL 2 BASIC17.34■□□□□ 0.37
UBE2D3P61077 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2D3P61077 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
UBE2D3P61077 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
UBE2D3P61077 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms