Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H2BDP58876 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H2BDP58876 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HIST1H2BDP58876 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2BDP58876 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HIST1H2BDP58876 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2BDP58876 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
HIST1H2BDP58876 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HIST1H2BDP58876 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HIST1H2BDP58876 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HIST1H2BDP58876 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 AC142381.3-201ENST00000568208 1670 ntBASIC18.81■□□□□ 0.6
HIST1H2BDP58876 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIST1H2BDP58876 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC18.8■□□□□ 0.6
HIST1H2BDP58876 AL024507.2-201ENST00000606070 2574 ntBASIC18.8■□□□□ 0.6
HIST1H2BDP58876 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC18.79■□□□□ 0.6
HIST1H2BDP58876 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIST1H2BDP58876 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
HIST1H2BDP58876 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HIST1H2BDP58876 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HIST1H2BDP58876 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST1H2BDP58876 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
HIST1H2BDP58876 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HIST1H2BDP58876 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HIST1H2BDP58876 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
HIST1H2BDP58876 AP004833.2-201ENST00000532228 1454 ntBASIC18.75■□□□□ 0.59
HIST1H2BDP58876 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC18.74■□□□□ 0.59
HIST1H2BDP58876 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2BDP58876 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2BDP58876 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC18.74■□□□□ 0.59
HIST1H2BDP58876 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HIST1H2BDP58876 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
HIST1H2BDP58876 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2BDP58876 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2BDP58876 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
HIST1H2BDP58876 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2BDP58876 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HIST1H2BDP58876 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
HIST1H2BDP58876 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2BDP58876 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.71■□□□□ 0.59
HIST1H2BDP58876 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HIST1H2BDP58876 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
HIST1H2BDP58876 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
HIST1H2BDP58876 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
HIST1H2BDP58876 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2BDP58876 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2BDP58876 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
HIST1H2BDP58876 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
HIST1H2BDP58876 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms