Protein–RNA interactions for Protein: P55284

Cdh5, Cadherin-5, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh5P55284 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.76■■□□□ 1.07
Cdh5P55284 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Cdh5P55284 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh5P55284 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh5P55284 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh5P55284 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
Cdh5P55284 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.75■■□□□ 1.07
Cdh5P55284 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cdh5P55284 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Cdh5P55284 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Cdh5P55284 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cdh5P55284 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Cdh5P55284 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh5P55284 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Cdh5P55284 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Cdh5P55284 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh5P55284 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh5P55284 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh5P55284 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh5P55284 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.71■■□□□ 1.07
Cdh5P55284 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cdh5P55284 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh5P55284 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Cdh5P55284 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Cdh5P55284 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Cdh5P55284 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Cdh5P55284 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Cdh5P55284 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh5P55284 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh5P55284 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Cdh5P55284 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh5P55284 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.67■■□□□ 1.06
Cdh5P55284 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Cdh5P55284 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.67■■□□□ 1.06
Cdh5P55284 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
Cdh5P55284 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.66■■□□□ 1.06
Cdh5P55284 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Cdh5P55284 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC21.65■■□□□ 1.06
Cdh5P55284 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Cdh5P55284 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
Cdh5P55284 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Cdh5P55284 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh5P55284 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Cdh5P55284 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Cdh5P55284 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.64■■□□□ 1.05
Cdh5P55284 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh5P55284 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdh5P55284 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.63■■□□□ 1.05
Cdh5P55284 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cdh5P55284 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Cdh5P55284 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Cdh5P55284 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.62■■□□□ 1.05
Cdh5P55284 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh5P55284 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh5P55284 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
Cdh5P55284 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Cdh5P55284 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh5P55284 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Cdh5P55284 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.61■■□□□ 1.05
Cdh5P55284 Gm6311-201ENSMUST00000073790 878 ntBASIC21.61■■□□□ 1.05
Cdh5P55284 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Cdh5P55284 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.6■■□□□ 1.05
Cdh5P55284 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh5P55284 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh5P55284 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Cdh5P55284 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Cdh5P55284 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh5P55284 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.59■■□□□ 1.05
Cdh5P55284 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh5P55284 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh5P55284 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Cdh5P55284 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh5P55284 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Cdh5P55284 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh5P55284 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh5P55284 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Cdh5P55284 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Cdh5P55284 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms