Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
PDE1AP54750 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PDE1AP54750 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC30.4■■■□□ 2.46
PDE1AP54750 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
PDE1AP54750 AP004609.3-201ENST00000610705 1884 ntBASIC30.39■■■□□ 2.46
PDE1AP54750 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.39■■■□□ 2.46
PDE1AP54750 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.39■■■□□ 2.46
PDE1AP54750 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
PDE1AP54750 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PDE1AP54750 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
PDE1AP54750 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PDE1AP54750 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
PDE1AP54750 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDE1AP54750 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDE1AP54750 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
PDE1AP54750 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC30.37■■■□□ 2.45
PDE1AP54750 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PDE1AP54750 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDE1AP54750 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDE1AP54750 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.36■■■□□ 2.45
PDE1AP54750 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
PDE1AP54750 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PDE1AP54750 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
PDE1AP54750 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PDE1AP54750 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
PDE1AP54750 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PDE1AP54750 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
PDE1AP54750 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
PDE1AP54750 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.33■■■□□ 2.45
PDE1AP54750 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PDE1AP54750 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC30.33■■■□□ 2.45
PDE1AP54750 RPS2-202ENST00000526522 924 ntTSL 2 BASIC30.33■■■□□ 2.45
PDE1AP54750 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.33■■■□□ 2.45
PDE1AP54750 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
PDE1AP54750 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
PDE1AP54750 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC30.32■■■□□ 2.44
PDE1AP54750 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
PDE1AP54750 MED25-210ENST00000612854 801 ntTSL 5 BASIC30.32■■■□□ 2.44
PDE1AP54750 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC30.32■■■□□ 2.44
PDE1AP54750 MED25-214ENST00000622402 642 ntTSL 5 BASIC30.32■■■□□ 2.44
PDE1AP54750 AC142472.1-201ENST00000612013 1741 ntBASIC30.32■■■□□ 2.44
PDE1AP54750 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC30.32■■■□□ 2.44
PDE1AP54750 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.31■■■□□ 2.44
PDE1AP54750 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
PDE1AP54750 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.3■■■□□ 2.44
PDE1AP54750 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC30.3■■■□□ 2.44
PDE1AP54750 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE1AP54750 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE1AP54750 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE1AP54750 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
PDE1AP54750 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC30.29■■■□□ 2.44
PDE1AP54750 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC30.28■■■□□ 2.44
PDE1AP54750 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
PDE1AP54750 MIR639-201ENST00000384974 98 ntBASIC30.28■■■□□ 2.44
PDE1AP54750 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.28■■■□□ 2.44
PDE1AP54750 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.27■■■□□ 2.44
PDE1AP54750 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC30.27■■■□□ 2.44
PDE1AP54750 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC30.26■■■□□ 2.44
PDE1AP54750 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.44
PDE1AP54750 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC30.26■■■□□ 2.43
PDE1AP54750 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE1AP54750 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC30.25■■■□□ 2.43
PDE1AP54750 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE1AP54750 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
PDE1AP54750 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC30.25■■■□□ 2.43
PDE1AP54750 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
PDE1AP54750 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.24■■■□□ 2.43
PDE1AP54750 AL359258.2-201ENST00000564063 1566 ntBASIC30.24■■■□□ 2.43
PDE1AP54750 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC30.24■■■□□ 2.43
PDE1AP54750 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
PDE1AP54750 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC30.24■■■□□ 2.43
PDE1AP54750 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC30.24■■■□□ 2.43
PDE1AP54750 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
PDE1AP54750 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDE1AP54750 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC30.23■■■□□ 2.43
PDE1AP54750 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDE1AP54750 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
PDE1AP54750 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PDE1AP54750 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC30.22■■■□□ 2.43
PDE1AP54750 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC30.21■■■□□ 2.43
PDE1AP54750 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
PDE1AP54750 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.2■■■□□ 2.43
PDE1AP54750 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
PDE1AP54750 CREM-210ENST00000374721 2020 ntTSL 5 BASIC30.2■■■□□ 2.42
PDE1AP54750 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.19■■■□□ 2.42
PDE1AP54750 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDE1AP54750 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
PDE1AP54750 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDE1AP54750 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
PDE1AP54750 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PDE1AP54750 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC30.17■■■□□ 2.42
PDE1AP54750 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC30.16■■■□□ 2.42
PDE1AP54750 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
PDE1AP54750 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
PDE1AP54750 AC091060.1-201ENST00000623524 1766 ntBASIC30.15■■■□□ 2.42
PDE1AP54750 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
PDE1AP54750 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDE1AP54750 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDE1AP54750 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
PDE1AP54750 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms