Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 RARRES2P2-201ENST00000394842 485 ntBASIC26.77■■□□□ 1.88
CDR1P51861 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC26.77■■□□□ 1.88
CDR1P51861 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CDR1P51861 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.88
CDR1P51861 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.76■■□□□ 1.87
CDR1P51861 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDR1P51861 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.76■■□□□ 1.87
CDR1P51861 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CDR1P51861 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CDR1P51861 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDR1P51861 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDR1P51861 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CDR1P51861 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC26.74■■□□□ 1.87
CDR1P51861 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC26.73■■□□□ 1.87
CDR1P51861 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDR1P51861 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDR1P51861 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDR1P51861 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.73■■□□□ 1.87
CDR1P51861 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CDR1P51861 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
CDR1P51861 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.72■■□□□ 1.87
CDR1P51861 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.72■■□□□ 1.87
CDR1P51861 AL121749.1-202ENST00000609313 2153 ntBASIC26.71■■□□□ 1.87
CDR1P51861 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CDR1P51861 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CDR1P51861 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CDR1P51861 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
CDR1P51861 AC060814.1-201ENST00000554326 538 ntBASIC26.71■■□□□ 1.87
CDR1P51861 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDR1P51861 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.71■■□□□ 1.87
CDR1P51861 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CDR1P51861 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.71■■□□□ 1.87
CDR1P51861 DRD5P2-201ENST00000421395 2012 ntBASIC26.7■■□□□ 1.87
CDR1P51861 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CDR1P51861 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CDR1P51861 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CDR1P51861 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
CDR1P51861 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 RNF126P1-201ENST00000567452 1320 ntBASIC26.68■■□□□ 1.86
CDR1P51861 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.68■■□□□ 1.86
CDR1P51861 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC26.68■■□□□ 1.86
CDR1P51861 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CDR1P51861 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDR1P51861 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
CDR1P51861 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDR1P51861 AP002414.2-202ENST00000590929 1450 ntBASIC26.67■■□□□ 1.86
CDR1P51861 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CDR1P51861 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
CDR1P51861 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CDR1P51861 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CDR1P51861 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDR1P51861 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CDR1P51861 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC26.65■■□□□ 1.86
CDR1P51861 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CDR1P51861 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
CDR1P51861 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CDR1P51861 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.64■■□□□ 1.86
CDR1P51861 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CDR1P51861 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDR1P51861 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CDR1P51861 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDR1P51861 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC26.63■■□□□ 1.85
CDR1P51861 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDR1P51861 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CDR1P51861 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.62■■□□□ 1.85
CDR1P51861 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.62■■□□□ 1.85
CDR1P51861 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
CDR1P51861 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDR1P51861 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDR1P51861 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CDR1P51861 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.61■■□□□ 1.85
CDR1P51861 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDR1P51861 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
CDR1P51861 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC26.61■■□□□ 1.85
CDR1P51861 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CDR1P51861 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.6■■□□□ 1.85
CDR1P51861 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
CDR1P51861 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.6■■□□□ 1.85
CDR1P51861 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
CDR1P51861 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDR1P51861 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CDR1P51861 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.59■■□□□ 1.85
CDR1P51861 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDR1P51861 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CDR1P51861 MOB2-207ENST00000614710 705 ntTSL 5 BASIC26.58■■□□□ 1.85
CDR1P51861 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CDR1P51861 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CDR1P51861 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.58■■□□□ 1.85
CDR1P51861 AL359258.2-201ENST00000564063 1566 ntBASIC26.58■■□□□ 1.85
CDR1P51861 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDR1P51861 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.57■■□□□ 1.84
CDR1P51861 ABHD17AP5-201ENST00000580133 923 ntBASIC26.57■■□□□ 1.84
CDR1P51861 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CDR1P51861 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
CDR1P51861 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms