Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDC34P49427 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDC34P49427 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC19.4■□□□□ 0.7
CDC34P49427 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC34P49427 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
CDC34P49427 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC34P49427 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDC34P49427 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC34P49427 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDC34P49427 LTK-203ENST00000453182 2412 ntTSL 2 BASIC19.39■□□□□ 0.69
CDC34P49427 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CDC34P49427 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CDC34P49427 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CDC34P49427 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC34P49427 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CDC34P49427 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CDC34P49427 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CDC34P49427 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC34P49427 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CDC34P49427 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC19.36■□□□□ 0.69
CDC34P49427 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CDC34P49427 AC135983.2-203ENST00000454486 1613 ntBASIC19.36■□□□□ 0.69
CDC34P49427 ERN1-208ENST00000606895 2068 ntBASIC19.36■□□□□ 0.69
CDC34P49427 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC34P49427 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CDC34P49427 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.35■□□□□ 0.69
CDC34P49427 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC19.34■□□□□ 0.69
CDC34P49427 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.34■□□□□ 0.69
CDC34P49427 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CDC34P49427 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC34P49427 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CDC34P49427 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
CDC34P49427 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CDC34P49427 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CDC34P49427 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC34P49427 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC34P49427 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.32■□□□□ 0.68
CDC34P49427 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC34P49427 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC19.32■□□□□ 0.68
CDC34P49427 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC34P49427 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
CDC34P49427 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC19.32■□□□□ 0.68
CDC34P49427 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.32■□□□□ 0.68
CDC34P49427 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CDC34P49427 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC34P49427 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CDC34P49427 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC34P49427 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC19.31■□□□□ 0.68
CDC34P49427 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CDC34P49427 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC19.3■□□□□ 0.68
CDC34P49427 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC19.3■□□□□ 0.68
CDC34P49427 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CDC34P49427 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC34P49427 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC19.3■□□□□ 0.68
CDC34P49427 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC34P49427 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CDC34P49427 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDC34P49427 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC34P49427 WHAMMP2-203ENST00000563942 1603 ntBASIC19.29■□□□□ 0.68
CDC34P49427 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC34P49427 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDC34P49427 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
CDC34P49427 SETD8P1-201ENST00000623146 1180 ntBASIC19.28■□□□□ 0.68
CDC34P49427 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC34P49427 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC34P49427 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDC34P49427 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC34P49427 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC34P49427 AC142472.1-201ENST00000612013 1741 ntBASIC19.27■□□□□ 0.68
CDC34P49427 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC34P49427 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC34P49427 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.67
CDC34P49427 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC34P49427 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.26■□□□□ 0.67
CDC34P49427 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC34P49427 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC34P49427 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC34P49427 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC34P49427 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 AC142381.3-201ENST00000568208 1670 ntBASIC19.25■□□□□ 0.67
CDC34P49427 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 RARRES2P7-201ENST00000567349 469 ntBASIC19.25■□□□□ 0.67
CDC34P49427 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDC34P49427 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC34P49427 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC19.24■□□□□ 0.67
CDC34P49427 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.24■□□□□ 0.67
CDC34P49427 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDC34P49427 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms