Protein–RNA interactions for Protein: P38902

RPB11, DNA-directed RNA polymerase II subunit RPB11, yeastyeast

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB11P38902 YFL013W-AYFL013W-A 804 nt5.5□□□□□ -1.53
RPB11P38902 DYS1YHR068W 1164 nt5.5□□□□□ -1.53
RPB11P38902 YMR007WYMR007W 381 nt5.5□□□□□ -1.53
RPB11P38902 SDH8YBR269C 417 nt5.5□□□□□ -1.53
RPB11P38902 RAP1YNL216W 2484 nt5.49□□□□□ -1.53
RPB11P38902 CTA1YDR256C 1548 nt5.48□□□□□ -1.53
RPB11P38902 OSM1YJR051W 1506 nt5.48□□□□□ -1.53
RPB11P38902 NTE1YML059C 5040 nt5.48□□□□□ -1.53
RPB11P38902 SES1YDR023W 1389 nt5.48□□□□□ -1.53
RPB11P38902 YJR107WYJR107W 987 nt5.48□□□□□ -1.53
RPB11P38902 ADA2YDR448W 1305 nt5.48□□□□□ -1.53
RPB11P38902 YCP4YCR004C 744 nt5.47□□□□□ -1.53
RPB11P38902 HPT1YDR399W 666 nt5.47□□□□□ -1.53
RPB11P38902 PIL1YGR086C 1020 nt5.47□□□□□ -1.53
RPB11P38902 SEN2YLR105C 1134 nt5.47□□□□□ -1.53
RPB11P38902 YPR204WYPR204W 3099 nt5.47□□□□□ -1.53
RPB11P38902 FET4YMR319C 1659 nt5.47□□□□□ -1.53
RPB11P38902 HRB1YNL004W 1365 nt5.46□□□□□ -1.54
RPB11P38902 COX5AYNL052W 462 nt5.46□□□□□ -1.54
RPB11P38902 CIT2YCR005C 1383 nt5.45□□□□□ -1.54
RPB11P38902 PPM1YDR435C 987 nt5.45□□□□□ -1.54
RPB11P38902 HAC1YFL031W 717 nt5.45□□□□□ -1.54
RPB11P38902 ERP2YAL007C 648 nt5.45□□□□□ -1.54
RPB11P38902 YJR142WYJR142W 1029 nt5.45□□□□□ -1.54
RPB11P38902 RCR1YBR005W 642 nt5.45□□□□□ -1.54
RPB11P38902 ARG81YML099C 2643 nt5.45□□□□□ -1.54
RPB11P38902 GYP8YFL027C 1494 nt5.45□□□□□ -1.54
RPB11P38902 NAF1YNL124W 1479 nt5.45□□□□□ -1.54
RPB11P38902 DMC1YER179W 1005 nt5.44□□□□□ -1.54
RPB11P38902 GEF1YJR040W 2340 nt5.44□□□□□ -1.54
RPB11P38902 ELP4YPL101W 1371 nt5.43□□□□□ -1.54
RPB11P38902 YDR415CYDR415C 1125 nt5.43□□□□□ -1.54
RPB11P38902 TRS31YDR472W 852 nt5.43□□□□□ -1.54
RPB11P38902 CIS3YJL158C 684 nt5.43□□□□□ -1.54
RPB11P38902 ATP23YNR020C 813 nt5.43□□□□□ -1.54
RPB11P38902 IMA5YJL216C 1746 nt5.43□□□□□ -1.54
RPB11P38902 PEX13YLR191W 1161 nt5.42□□□□□ -1.54
RPB11P38902 DPM1YPR183W 804 nt5.42□□□□□ -1.54
RPB11P38902 YML133CYML133C 4125 nt5.42□□□□□ -1.54
RPB11P38902 NUP53YMR153W 1428 nt5.41□□□□□ -1.54
RPB11P38902 TPO3YPR156C 1869 nt5.41□□□□□ -1.54
RPB11P38902 TOS6YNL300W 309 nt5.41□□□□□ -1.54
RPB11P38902 FRE5YOR384W 2085 nt5.4□□□□□ -1.54
RPB11P38902 TAD2YJL035C 753 nt5.4□□□□□ -1.54
RPB11P38902 CBK1YNL161W 2271 nt5.4□□□□□ -1.55
RPB11P38902 NMT1YLR195C 1368 nt5.4□□□□□ -1.55
RPB11P38902 ACS1YAL054C 2142 nt5.39□□□□□ -1.55
RPB11P38902 PMT3YOR321W 2262 nt5.39□□□□□ -1.55
RPB11P38902 YCR049CYCR049C 447 nt5.39□□□□□ -1.55
RPB11P38902 YDL177CYDL177C 513 nt5.39□□□□□ -1.55
RPB11P38902 NMA2YGR010W 1188 nt5.39□□□□□ -1.55
RPB11P38902 ICS3YJL077C 396 nt5.39□□□□□ -1.55
RPB11P38902 DUS4YLR405W 1104 nt5.39□□□□□ -1.55
RPB11P38902 YML6YML025C 861 nt5.39□□□□□ -1.55
RPB11P38902 MSI1YBR195C 1269 nt5.39□□□□□ -1.55
RPB11P38902 YGL081WYGL081W 963 nt5.38□□□□□ -1.55
RPB11P38902 PAM17YKR065C 594 nt5.38□□□□□ -1.55
RPB11P38902 RTC4YNL254C 1206 nt5.38□□□□□ -1.55
RPB11P38902 CYC8YBR112C 2901 nt5.38□□□□□ -1.55
RPB11P38902 SLX5YDL013W 1860 nt5.37□□□□□ -1.55
RPB11P38902 snR82snR82 268 nt5.37□□□□□ -1.55
RPB11P38902 OAC1YKL120W 975 nt5.37□□□□□ -1.55
RPB11P38902 YBR284WYBR284W 2394 nt5.36□□□□□ -1.55
RPB11P38902 MIP1YOR330C 3765 nt5.36□□□□□ -1.55
RPB11P38902 COX9YDL067C 180 nt5.36□□□□□ -1.55
RPB11P38902 YPT1YFL038C 621 nt5.36□□□□□ -1.55
RPB11P38902 YMR034CYMR034C 1305 nt5.36□□□□□ -1.55
RPB11P38902 RSA4YCR072C 1548 nt5.36□□□□□ -1.55
RPB11P38902 RGD1YBR260C 2001 nt5.36□□□□□ -1.55
RPB11P38902 MKK1YOR231W 1527 nt5.35□□□□□ -1.55
RPB11P38902 GDH1YOR375C 1365 nt5.35□□□□□ -1.55
RPB11P38902 YGR127WYGR127W 939 nt5.35□□□□□ -1.55
RPB11P38902 NCA3YJL116C 1014 nt5.35□□□□□ -1.55
RPB11P38902 IRC11YOR013W 471 nt5.35□□□□□ -1.55
RPB11P38902 YBR113WYBR113W 483 nt5.35□□□□□ -1.55
RPB11P38902 EFT2YDR385W 2529 nt5.35□□□□□ -1.55
RPB11P38902 EFT1YOR133W 2529 nt5.35□□□□□ -1.55
RPB11P38902 HEM1YDR232W 1647 nt5.34□□□□□ -1.55
RPB11P38902 MPA43YNL249C 1629 nt5.34□□□□□ -1.55
RPB11P38902 KTR5YNL029C 1569 nt5.34□□□□□ -1.55
RPB11P38902 POP1YNL221C 2628 nt5.34□□□□□ -1.55
RPB11P38902 UTR2YEL040W 1404 nt5.34□□□□□ -1.55
RPB11P38902 URH1YDR400W 1023 nt5.34□□□□□ -1.55
RPB11P38902 YSC83YHR017W 1158 nt5.34□□□□□ -1.55
RPB11P38902 YML122CYML122C 381 nt5.34□□□□□ -1.55
RPB11P38902 MOD5YOR274W 1287 nt5.34□□□□□ -1.55
RPB11P38902 CRP1YHR146W 1398 nt5.33□□□□□ -1.56
RPB11P38902 YPQ2YDR352W 954 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)BtG(GCC)B 71 nt5.33□□□□□ -1.56
RPB11P38902 SUF16tG(GCC)C 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)D1tG(GCC)D1 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)D2tG(GCC)D2 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)EtG(GCC)E 71 nt5.33□□□□□ -1.56
RPB11P38902 SUF20tG(GCC)F1 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)F2tG(GCC)F2 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)G1tG(GCC)G1 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)G2tG(GCC)G2 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)J1tG(GCC)J1 71 nt5.33□□□□□ -1.56
RPB11P38902 SUF23tG(GCC)J2 71 nt5.33□□□□□ -1.56
RPB11P38902 tG(GCC)MtG(GCC)M 71 nt5.33□□□□□ -1.56
Retrieved 100 of 7,029 protein–RNA pairs in 18.3 ms