Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC31.73■■■□□ 2.67
RFC4P35249 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RFC4P35249 HES6-204ENST00000409182 863 ntTSL 2 BASIC31.73■■■□□ 2.67
RFC4P35249 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC31.73■■■□□ 2.67
RFC4P35249 AC131212.1-201ENST00000613771 668 ntBASIC31.73■■■□□ 2.67
RFC4P35249 PVT1_1.1-201ENST00000615125 194 ntBASIC31.73■■■□□ 2.67
RFC4P35249 ST7-AS1-201ENST00000456775 1889 ntBASIC31.73■■■□□ 2.67
RFC4P35249 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
RFC4P35249 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RFC4P35249 AC018755.3-202ENST00000596210 929 ntBASIC31.72■■■□□ 2.67
RFC4P35249 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
RFC4P35249 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC31.71■■■□□ 2.67
RFC4P35249 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RFC4P35249 AC019069.1-201ENST00000610008 1333 ntBASIC31.71■■■□□ 2.67
RFC4P35249 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RFC4P35249 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
RFC4P35249 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC31.69■■■□□ 2.66
RFC4P35249 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC31.69■■■□□ 2.66
RFC4P35249 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC31.69■■■□□ 2.66
RFC4P35249 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC31.66■■■□□ 2.66
RFC4P35249 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.66■■■□□ 2.66
RFC4P35249 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.66■■■□□ 2.66
RFC4P35249 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RFC4P35249 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC31.66■■■□□ 2.66
RFC4P35249 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RFC4P35249 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
RFC4P35249 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
RFC4P35249 GUSBP5-201ENST00000418136 578 ntBASIC31.65■■■□□ 2.66
RFC4P35249 THA1P-201ENST00000590384 1145 ntBASIC31.65■■■□□ 2.66
RFC4P35249 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC31.64■■■□□ 2.66
RFC4P35249 OR2A1-AS1-204ENST00000470435 602 ntBASIC31.64■■■□□ 2.66
RFC4P35249 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
RFC4P35249 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RFC4P35249 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RFC4P35249 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC31.62■■■□□ 2.65
RFC4P35249 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC31.62■■■□□ 2.65
RFC4P35249 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC31.62■■■□□ 2.65
RFC4P35249 MIR4508-201ENST00000584178 70 ntBASIC31.62■■■□□ 2.65
RFC4P35249 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
RFC4P35249 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
RFC4P35249 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC31.61■■■□□ 2.65
RFC4P35249 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.61■■■□□ 2.65
RFC4P35249 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
RFC4P35249 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC31.6■■■□□ 2.65
RFC4P35249 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
RFC4P35249 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RFC4P35249 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RFC4P35249 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC31.59■■■□□ 2.65
RFC4P35249 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RFC4P35249 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
RFC4P35249 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
RFC4P35249 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
RFC4P35249 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RFC4P35249 IDNK-203ENST00000405990 629 ntTSL 2 BASIC31.57■■■□□ 2.64
RFC4P35249 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
RFC4P35249 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RFC4P35249 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
RFC4P35249 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
RFC4P35249 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC31.56■■■□□ 2.64
RFC4P35249 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC31.55■■■□□ 2.64
RFC4P35249 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RFC4P35249 IDNK-201ENST00000376417 511 ntTSL 5 BASIC31.55■■■□□ 2.64
RFC4P35249 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
RFC4P35249 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC31.55■■■□□ 2.64
RFC4P35249 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
RFC4P35249 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC31.54■■■□□ 2.64
RFC4P35249 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
RFC4P35249 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC31.53■■■□□ 2.64
RFC4P35249 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RFC4P35249 AC103724.3-201ENST00000564481 992 ntBASIC31.53■■■□□ 2.64
RFC4P35249 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC31.53■■■□□ 2.64
RFC4P35249 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.52■■■□□ 2.64
RFC4P35249 PRTG-204ENST00000561292 833 ntTSL 3 BASIC31.52■■■□□ 2.64
RFC4P35249 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RFC4P35249 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC31.52■■■□□ 2.64
RFC4P35249 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RFC4P35249 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.52■■■□□ 2.64
RFC4P35249 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC31.52■■■□□ 2.64
RFC4P35249 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.52■■■□□ 2.64
RFC4P35249 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
RFC4P35249 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.51■■■□□ 2.63
RFC4P35249 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RFC4P35249 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.51■■■□□ 2.63
RFC4P35249 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC31.51■■■□□ 2.63
RFC4P35249 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC31.51■■■□□ 2.63
RFC4P35249 AL031848.2-201ENST00000607670 837 ntBASIC31.51■■■□□ 2.63
RFC4P35249 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.63
RFC4P35249 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
RFC4P35249 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
RFC4P35249 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RFC4P35249 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RFC4P35249 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RFC4P35249 MTX2-204ENST00000443241 799 ntTSL 3 BASIC31.49■■■□□ 2.63
RFC4P35249 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC31.48■■■□□ 2.63
RFC4P35249 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
RFC4P35249 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
RFC4P35249 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC31.46■■■□□ 2.63
RFC4P35249 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC31.46■■■□□ 2.63
RFC4P35249 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC31.45■■■□□ 2.63
RFC4P35249 AL356441.2-201ENST00000443009 864 ntBASIC31.45■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms