Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cbx3P23198 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cbx3P23198 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cbx3P23198 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cbx3P23198 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cbx3P23198 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cbx3P23198 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cbx3P23198 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Cbx3P23198 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cbx3P23198 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.32■□□□□ 0.84
Cbx3P23198 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cbx3P23198 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cbx3P23198 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cbx3P23198 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.31■□□□□ 0.84
Cbx3P23198 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cbx3P23198 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cbx3P23198 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cbx3P23198 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cbx3P23198 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Cbx3P23198 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cbx3P23198 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Cbx3P23198 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx3P23198 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx3P23198 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx3P23198 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Cbx3P23198 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cbx3P23198 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cbx3P23198 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx3P23198 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.3■□□□□ 0.84
Cbx3P23198 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx3P23198 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx3P23198 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.28■□□□□ 0.84
Cbx3P23198 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx3P23198 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx3P23198 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx3P23198 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx3P23198 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cbx3P23198 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx3P23198 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx3P23198 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx3P23198 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cbx3P23198 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.26■□□□□ 0.83
Cbx3P23198 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx3P23198 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Cbx3P23198 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Cbx3P23198 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx3P23198 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Cbx3P23198 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx3P23198 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx3P23198 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx3P23198 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx3P23198 6530409C15Rik-202ENSMUST00000143551 1573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx3P23198 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx3P23198 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx3P23198 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Cbx3P23198 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx3P23198 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Cbx3P23198 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx3P23198 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cbx3P23198 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cbx3P23198 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cbx3P23198 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cbx3P23198 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cbx3P23198 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cbx3P23198 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cbx3P23198 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Cbx3P23198 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cbx3P23198 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cbx3P23198 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.19■□□□□ 0.82
Cbx3P23198 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cbx3P23198 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cbx3P23198 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cbx3P23198 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cbx3P23198 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.19■□□□□ 0.82
Cbx3P23198 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cbx3P23198 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cbx3P23198 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cbx3P23198 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cbx3P23198 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cbx3P23198 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cbx3P23198 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cbx3P23198 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cbx3P23198 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cbx3P23198 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbx3P23198 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbx3P23198 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbx3P23198 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.16■□□□□ 0.82
Cbx3P23198 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbx3P23198 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cbx3P23198 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 126.8 ms