Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.42■■□□□ 1.82
TNFAIP3P21580 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.42■■□□□ 1.82
TNFAIP3P21580 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
TNFAIP3P21580 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
TNFAIP3P21580 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
TNFAIP3P21580 AC142472.1-201ENST00000612013 1741 ntBASIC26.4■■□□□ 1.82
TNFAIP3P21580 ZNRF2P2-203ENST00000454624 420 ntBASIC26.4■■□□□ 1.82
TNFAIP3P21580 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC26.4■■□□□ 1.82
TNFAIP3P21580 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.39■■□□□ 1.82
TNFAIP3P21580 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TNFAIP3P21580 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
TNFAIP3P21580 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
TNFAIP3P21580 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
TNFAIP3P21580 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
TNFAIP3P21580 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.38■■□□□ 1.81
TNFAIP3P21580 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.38■■□□□ 1.81
TNFAIP3P21580 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.38■■□□□ 1.81
TNFAIP3P21580 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.37■■□□□ 1.81
TNFAIP3P21580 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNFAIP3P21580 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.37■■□□□ 1.81
TNFAIP3P21580 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.37■■□□□ 1.81
TNFAIP3P21580 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
TNFAIP3P21580 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.36■■□□□ 1.81
TNFAIP3P21580 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
TNFAIP3P21580 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TNFAIP3P21580 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.35■■□□□ 1.81
TNFAIP3P21580 AC008813.1-201ENST00000536597 885 ntBASIC26.35■■□□□ 1.81
TNFAIP3P21580 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.35■■□□□ 1.81
TNFAIP3P21580 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TNFAIP3P21580 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.34■■□□□ 1.81
TNFAIP3P21580 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
TNFAIP3P21580 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.34■■□□□ 1.81
TNFAIP3P21580 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFAIP3P21580 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFAIP3P21580 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.34■■□□□ 1.81
TNFAIP3P21580 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
TNFAIP3P21580 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNFAIP3P21580 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.33■■□□□ 1.81
TNFAIP3P21580 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
TNFAIP3P21580 AC145676.1-201ENST00000514988 2004 ntBASIC26.32■■□□□ 1.8
TNFAIP3P21580 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.32■■□□□ 1.8
TNFAIP3P21580 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.32■■□□□ 1.8
TNFAIP3P21580 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
TNFAIP3P21580 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
TNFAIP3P21580 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFAIP3P21580 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFAIP3P21580 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.31■■□□□ 1.8
TNFAIP3P21580 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
TNFAIP3P21580 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
TNFAIP3P21580 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.3■■□□□ 1.8
TNFAIP3P21580 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TNFAIP3P21580 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFAIP3P21580 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.29■■□□□ 1.8
TNFAIP3P21580 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TNFAIP3P21580 AC092803.2-201ENST00000564287 1899 ntBASIC26.29■■□□□ 1.8
TNFAIP3P21580 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
TNFAIP3P21580 MIR219A2-201ENST00000608502 1504 ntBASIC26.29■■□□□ 1.8
TNFAIP3P21580 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
TNFAIP3P21580 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
TNFAIP3P21580 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFAIP3P21580 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
TNFAIP3P21580 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
TNFAIP3P21580 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC26.27■■□□□ 1.8
TNFAIP3P21580 ABHD17AP4-201ENST00000411545 909 ntBASIC26.27■■□□□ 1.8
TNFAIP3P21580 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.27■■□□□ 1.8
TNFAIP3P21580 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.27■■□□□ 1.8
TNFAIP3P21580 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.26■■□□□ 1.79
TNFAIP3P21580 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TNFAIP3P21580 AC148477.6-201ENST00000623746 465 ntBASIC26.26■■□□□ 1.79
TNFAIP3P21580 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
TNFAIP3P21580 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TNFAIP3P21580 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC26.25■■□□□ 1.79
TNFAIP3P21580 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TNFAIP3P21580 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TNFAIP3P21580 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFAIP3P21580 HLA-V-202ENST00000446817 847 ntBASIC26.25■■□□□ 1.79
TNFAIP3P21580 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TNFAIP3P21580 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TNFAIP3P21580 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
TNFAIP3P21580 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNFAIP3P21580 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.24■■□□□ 1.79
TNFAIP3P21580 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.24■■□□□ 1.79
TNFAIP3P21580 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.24■■□□□ 1.79
TNFAIP3P21580 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.24■■□□□ 1.79
TNFAIP3P21580 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
TNFAIP3P21580 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNFAIP3P21580 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TNFAIP3P21580 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.23■■□□□ 1.79
TNFAIP3P21580 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TNFAIP3P21580 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.23■■□□□ 1.79
TNFAIP3P21580 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.23■■□□□ 1.79
TNFAIP3P21580 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
TNFAIP3P21580 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 413.1 ms