Protein–RNA interactions for Protein: P20782

Chrne, Acetylcholine receptor subunit epsilon, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChrneP20782 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ChrneP20782 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ChrneP20782 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
ChrneP20782 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ChrneP20782 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ChrneP20782 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.17■□□□□ 0.98
ChrneP20782 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChrneP20782 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.17■□□□□ 0.98
ChrneP20782 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ChrneP20782 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChrneP20782 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChrneP20782 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChrneP20782 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ChrneP20782 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ChrneP20782 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChrneP20782 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChrneP20782 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ChrneP20782 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
ChrneP20782 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ChrneP20782 Gm16437-201ENSMUST00000025669 507 ntBASIC21.14■□□□□ 0.97
ChrneP20782 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ChrneP20782 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ChrneP20782 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ChrneP20782 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.13■□□□□ 0.97
ChrneP20782 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ChrneP20782 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChrneP20782 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChrneP20782 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.12■□□□□ 0.97
ChrneP20782 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ChrneP20782 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ChrneP20782 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.12■□□□□ 0.97
ChrneP20782 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ChrneP20782 Terc-201ENSMUST00000082862 423 ntBASIC21.12■□□□□ 0.97
ChrneP20782 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ChrneP20782 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.11■□□□□ 0.97
ChrneP20782 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ChrneP20782 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ChrneP20782 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ChrneP20782 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.1■□□□□ 0.97
ChrneP20782 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ChrneP20782 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ChrneP20782 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ChrneP20782 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.09■□□□□ 0.97
ChrneP20782 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ChrneP20782 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.09■□□□□ 0.97
ChrneP20782 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ChrneP20782 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ChrneP20782 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.08■□□□□ 0.97
ChrneP20782 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.08■□□□□ 0.97
ChrneP20782 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ChrneP20782 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ChrneP20782 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ChrneP20782 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ChrneP20782 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ChrneP20782 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ChrneP20782 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ChrneP20782 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.05■□□□□ 0.96
ChrneP20782 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ChrneP20782 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ChrneP20782 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ChrneP20782 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.04■□□□□ 0.96
ChrneP20782 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ChrneP20782 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ChrneP20782 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ChrneP20782 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.03■□□□□ 0.96
ChrneP20782 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
ChrneP20782 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
ChrneP20782 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ChrneP20782 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ChrneP20782 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC21.02■□□□□ 0.96
ChrneP20782 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.02■□□□□ 0.96
ChrneP20782 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ChrneP20782 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ChrneP20782 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
ChrneP20782 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.01■□□□□ 0.95
ChrneP20782 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ChrneP20782 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21■□□□□ 0.95
ChrneP20782 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChrneP20782 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ChrneP20782 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21■□□□□ 0.95
ChrneP20782 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ChrneP20782 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ChrneP20782 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ChrneP20782 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ChrneP20782 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.98■□□□□ 0.95
ChrneP20782 Cap2-205ENSMUST00000225824 1634 ntBASIC20.98■□□□□ 0.95
ChrneP20782 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ChrneP20782 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms