Protein–RNA interactions for Protein: P14373

TRIM27, Zinc finger protein RFP, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27P14373 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
TRIM27P14373 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
TRIM27P14373 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM27P14373 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM27P14373 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC31.61■■■□□ 2.65
TRIM27P14373 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
TRIM27P14373 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC31.6■■■□□ 2.65
TRIM27P14373 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM27P14373 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
TRIM27P14373 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM27P14373 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM27P14373 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.6■■■□□ 2.65
TRIM27P14373 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM27P14373 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.6■■■□□ 2.65
TRIM27P14373 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
TRIM27P14373 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM27P14373 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
TRIM27P14373 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC31.58■■■□□ 2.65
TRIM27P14373 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC31.58■■■□□ 2.65
TRIM27P14373 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM27P14373 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
TRIM27P14373 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
TRIM27P14373 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM27P14373 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM27P14373 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.56■■■□□ 2.64
TRIM27P14373 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
TRIM27P14373 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM27P14373 AP004609.3-201ENST00000610705 1884 ntBASIC31.55■■■□□ 2.64
TRIM27P14373 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
TRIM27P14373 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM27P14373 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM27P14373 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
TRIM27P14373 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.54■■■□□ 2.64
TRIM27P14373 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.54■■■□□ 2.64
TRIM27P14373 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
TRIM27P14373 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM27P14373 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
TRIM27P14373 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM27P14373 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.52■■■□□ 2.64
TRIM27P14373 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
TRIM27P14373 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
TRIM27P14373 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.63
TRIM27P14373 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.51■■■□□ 2.63
TRIM27P14373 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
TRIM27P14373 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.5■■■□□ 2.63
TRIM27P14373 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.5■■■□□ 2.63
TRIM27P14373 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.49■■■□□ 2.63
TRIM27P14373 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
TRIM27P14373 AL359258.2-201ENST00000564063 1566 ntBASIC31.48■■■□□ 2.63
TRIM27P14373 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM27P14373 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
TRIM27P14373 AC142472.1-201ENST00000612013 1741 ntBASIC31.48■■■□□ 2.63
TRIM27P14373 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM27P14373 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM27P14373 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
TRIM27P14373 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM27P14373 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.47■■■□□ 2.63
TRIM27P14373 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
TRIM27P14373 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
TRIM27P14373 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.46■■■□□ 2.63
TRIM27P14373 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM27P14373 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.63
TRIM27P14373 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.45■■■□□ 2.62
TRIM27P14373 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
TRIM27P14373 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
TRIM27P14373 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.44■■■□□ 2.62
TRIM27P14373 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC31.43■■■□□ 2.62
TRIM27P14373 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM27P14373 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM27P14373 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.43■■■□□ 2.62
TRIM27P14373 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
TRIM27P14373 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.43■■■□□ 2.62
TRIM27P14373 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.43■■■□□ 2.62
TRIM27P14373 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
TRIM27P14373 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM27P14373 MIR4449-201ENST00000578365 66 ntBASIC31.42■■■□□ 2.62
TRIM27P14373 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.42■■■□□ 2.62
TRIM27P14373 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM27P14373 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
TRIM27P14373 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
TRIM27P14373 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.4■■■□□ 2.62
TRIM27P14373 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM27P14373 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.4■■■□□ 2.62
TRIM27P14373 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
TRIM27P14373 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
TRIM27P14373 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.39■■■□□ 2.62
TRIM27P14373 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
TRIM27P14373 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.38■■■□□ 2.61
TRIM27P14373 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
TRIM27P14373 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms