Protein–RNA interactions for Protein: P10155

TROVE2, 60 kDa SS-A/Ro ribonucleoprotein, humanhuman

Known RBP eCLIP

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TROVE2P10155 VAPB-204ENST00000475243 7936 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.498e-6■■■■□ 26.6
TROVE2P10155 GYS1-201ENST00000263276 3378 ntTSL 1 (best) BASIC11.28□□□□□ -0.68e-6■■■■□ 26.6
TROVE2P10155 CERK-203ENST00000460254 434 ntTSL 211.02□□□□□ -0.658e-6■■■■□ 26.6
TROVE2P10155 MTRNR2L4-201ENST00000399974 1762 ntAPPRIS P1 BASIC10.85□□□□□ -0.678e-6■■■■□ 26.6
TROVE2P10155 RECQL4-203ENST00000529424 324 ntTSL 29.92□□□□□ -0.828e-6■■■■□ 26.6
TROVE2P10155 VAPB-201ENST00000265619 3596 ntTSL 29.18□□□□□ -0.948e-6■■■■□ 26.6
TROVE2P10155 PCAT19-204ENST00000595837 1232 ntTSL 1 (best)8.66□□□□□ -1.028e-6■■■■□ 26.6
TROVE2P10155 VAPB-206ENST00000520497 937 ntTSL 28.42□□□□□ -1.068e-6■■■■□ 26.6
TROVE2P10155 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.9□□□□□ -1.158e-6■■■■□ 26.6
TROVE2P10155 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.9□□□□□ -1.158e-6■■■■□ 26.6
TROVE2P10155 PCAT19-202ENST00000594315 1062 ntTSL 1 (best)7.89□□□□□ -1.158e-6■■■■□ 26.6
TROVE2P10155 PCAT19-206ENST00000598215 596 ntTSL 46.87□□□□□ -1.318e-6■■■■□ 26.6
TROVE2P10155 PCAT19-203ENST00000595063 601 ntTSL 46.56□□□□□ -1.368e-6■■■■□ 26.6
TROVE2P10155 PCAT19-207ENST00000599801 711 ntTSL 56.56□□□□□ -1.368e-6■■■■□ 26.6
TROVE2P10155 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.42□□□□□ -1.388e-6■■■■□ 26.6
TROVE2P10155 PCAT19-205ENST00000597702 881 ntTSL 36.09□□□□□ -1.438e-6■■■■□ 26.6
TROVE2P10155 U8.9-201ENST00000365667 134 ntBASIC3.32□□□□□ -1.888e-6■■■■□ 26.6
TROVE2P10155 CCDC93-209ENST00000488908 268 ntTSL 50.51□□□□□ -2.338e-6■■■■□ 26.6
TROVE2P10155 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.87■■□□□ 1.572e-16■■■■□ 26.5
TROVE2P10155 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.372e-16■■■■□ 26.5
TROVE2P10155 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.99■□□□□ 0.792e-16■■■■□ 26.5
TROVE2P10155 BBC3-206ENST00000601438 1747 nt18.03■□□□□ 0.482e-16■■■■□ 26.5
TROVE2P10155 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.13■□□□□ 0.332e-16■■■■□ 26.5
TROVE2P10155 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.543e-6■■■■□ 26.4
TROVE2P10155 C19orf47-201ENST00000357884 1774 ntTSL 517.66■□□□□ 0.423e-6■■■■□ 26.4
TROVE2P10155 C19orf47-208ENST00000582783 3628 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.343e-6■■■■□ 26.4
TROVE2P10155 C19orf47-205ENST00000580977 563 ntTSL 412.89□□□□□ -0.353e-6■■■■□ 26.4
TROVE2P10155 C19orf47-204ENST00000580606 803 ntAPPRIS ALT2 TSL 311.17□□□□□ -0.623e-6■■■■□ 26.4
TROVE2P10155 C19orf47-206ENST00000582006 581 ntAPPRIS ALT2 TSL 49.86□□□□□ -0.833e-6■■■■□ 26.4
TROVE2P10155 Y_RNA.517-201ENST00000384551 106 ntBASIC0.66□□□□□ -2.33e-6■■■■□ 26.4
TROVE2P10155 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.77■□□□□ 0.441e-6■■■■□ 26
TROVE2P10155 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.18■□□□□ 0.181e-6■■■■□ 26
TROVE2P10155 UCKL1-205ENST00000483710 524 ntTSL 39.5□□□□□ -0.891e-6■■■■□ 26
TROVE2P10155 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.56□□□□□ -2.52e-10■■■■□ 25.9
TROVE2P10155 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.453e-6■■■■□ 25.8
TROVE2P10155 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.283e-6■■■■□ 25.8
TROVE2P10155 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.553e-6■■■■□ 25.8
TROVE2P10155 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.363e-6■■■■□ 25.8
TROVE2P10155 AKT1-215ENST00000555926 553 ntTSL 316.69■□□□□ 0.263e-6■■■■□ 25.8
TROVE2P10155 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.323e-6■■■■□ 25.8
TROVE2P10155 AKT1-202ENST00000402615 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.53e-6■■■■□ 25.8
TROVE2P10155 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.24■■□□□ 1.953e-10■■■■□ 25.5
TROVE2P10155 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.883e-10■■■■□ 25.5
TROVE2P10155 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.09■■□□□ 1.613e-10■■■■□ 25.5
TROVE2P10155 PQLC1-206ENST00000474967 2319 ntTSL 520.73■□□□□ 0.913e-10■■■■□ 25.5
TROVE2P10155 PQLC1-201ENST00000351365 2414 ntTSL 219.43■□□□□ 0.73e-10■■■■□ 25.5
TROVE2P10155 PQLC1-204ENST00000466449 2887 ntTSL 218.01■□□□□ 0.473e-10■■■■□ 25.5
TROVE2P10155 PQLC1-205ENST00000469369 593 ntTSL 411.64□□□□□ -0.553e-10■■■■□ 25.5
TROVE2P10155 PQLC1-209ENST00000589000 558 ntTSL 49.71□□□□□ -0.863e-10■■■■□ 25.5
TROVE2P10155 ATP6V0A1-223ENST00000589759 502 ntTSL 35.69□□□□□ -1.57e-7■■■■□ 25.4
TROVE2P10155 DSG4-202ENST00000359747 4526 ntTSL 1 (best) BASIC11.52□□□□□ -0.578e-6■■■■□ 25.2
TROVE2P10155 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.918e-6■■■■□ 25.2
TROVE2P10155 AC010320.4-201ENST00000594379 1905 ntTSL 2 BASIC8.63□□□□□ -1.038e-6■■■■□ 25.2
TROVE2P10155 Y_RNA.510-201ENST00000384511 114 ntBASIC1.96□□□□□ -2.18e-6■■■■□ 25.2
TROVE2P10155 Y_RNA.463-201ENST00000384271 102 ntBASIC0.12□□□□□ -2.398e-6■■■■□ 25.2
TROVE2P10155 TNRC6A-205ENST00000464539 1853 ntTSL 1 (best)12.23□□□□□ -0.452e-14■■■■□ 25.1
TROVE2P10155 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.032e-14■■■■□ 25.1
TROVE2P10155 TNRC6A-201ENST00000315183 8303 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.062e-14■■■■□ 25.1
TROVE2P10155 TNRC6A-203ENST00000450465 3700 ntTSL 28.36□□□□□ -1.072e-14■■■■□ 25.1
TROVE2P10155 TNRC6A-207ENST00000491718 7956 ntTSL 1 (best)7.25□□□□□ -1.252e-14■■■■□ 25.1
TROVE2P10155 TNRC6A-216ENST00000569098 587 ntTSL 55.68□□□□□ -1.52e-14■■■■□ 25.1
TROVE2P10155 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.175e-15■■■■□ 24.8
TROVE2P10155 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.84□□□□□ -0.195e-15■■■■□ 24.8
TROVE2P10155 Y_RNA.631-201ENST00000459607 101 ntBASIC-0.1□□□□□ -2.437e-10■■■■□ 24.8
TROVE2P10155 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.48□□□□□ -2.497e-10■■■■□ 24.8
TROVE2P10155 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.86■□□□□ 0.611e-6■■■■□ 24.7
TROVE2P10155 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.51e-6■■■■□ 24.7
TROVE2P10155 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.341e-6■■■■□ 24.7
TROVE2P10155 FAM53A-203ENST00000463238 558 ntTSL 313.18□□□□□ -0.31e-6■■■■□ 24.7
TROVE2P10155 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.65□□□□□ -2.671e-6■■■■□ 24.7
TROVE2P10155 METTL7A-204ENST00000550097 1846 ntTSL 514.41□□□□□ -0.11e-5■■■■□ 24.6
TROVE2P10155 METTL7A-202ENST00000547104 1825 ntTSL 1 (best)13□□□□□ -0.331e-5■■■■□ 24.6
TROVE2P10155 METTL7A-203ENST00000548553 4076 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.871e-5■■■■□ 24.6
TROVE2P10155 METTL7A-201ENST00000332160 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.911e-5■■■■□ 24.6
TROVE2P10155 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.223e-6■■■■□ 24.6
TROVE2P10155 MEGF6-205ENST00000485002 4705 ntTSL 517.2■□□□□ 0.343e-6■■■■□ 24.6
TROVE2P10155 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.021e-9■■■■□ 24.3
TROVE2P10155 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.765e-14■■■■□ 24.3
TROVE2P10155 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.15■□□□□ 0.55e-14■■■■□ 24.3
TROVE2P10155 DUSP9-203ENST00000477033 430 ntTSL 317.95■□□□□ 0.461e-9■■■■□ 24.3
TROVE2P10155 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.23■□□□□ 0.195e-14■■■■□ 24.3
TROVE2P10155 EHMT1-224ENST00000630754 709 ntTSL 315.81■□□□□ 0.125e-14■■■■□ 24.3
TROVE2P10155 EHMT1-202ENST00000460486 818 ntTSL 515.68■□□□□ 0.15e-14■■■■□ 24.3
TROVE2P10155 EHMT1-201ENST00000371394 2679 ntTSL 214.79□□□□□ -0.045e-14■■■■□ 24.3
TROVE2P10155 EHMT1-244ENST00000637655 100 ntTSL 513.67□□□□□ -0.225e-14■■■■□ 24.3
TROVE2P10155 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.49□□□□□ -0.252e-7■■■■□ 24.3
TROVE2P10155 EHMT1-228ENST00000636027 3114 ntTSL 512.8□□□□□ -0.365e-14■■■■□ 24.3
TROVE2P10155 EHMT1-220ENST00000626216 558 ntTSL 312.53□□□□□ -0.45e-14■■■■□ 24.3
TROVE2P10155 EHMT1-221ENST00000629335 3600 ntTSL 5 BASIC11.62□□□□□ -0.555e-14■■■■□ 24.3
TROVE2P10155 EHMT1-231ENST00000636376 100 ntTSL 510.58□□□□□ -0.725e-14■■■■□ 24.3
TROVE2P10155 EHMT1-215ENST00000492232 710 ntTSL 310.54□□□□□ -0.725e-14■■■■□ 24.3
TROVE2P10155 SEPT9-247ENST00000593189 817 ntTSL 510.02□□□□□ -0.812e-7■■■■□ 24.3
TROVE2P10155 EHMT1-241ENST00000637335 86 ntTSL 59.17□□□□□ -0.945e-14■■■■□ 24.3
TROVE2P10155 AL590627.2-202ENST00000636318 138 ntTSL 58.48□□□□□ -1.055e-14■■■■□ 24.3
TROVE2P10155 NCOR1-223ENST00000583226 614 ntTSL 55.92□□□□□ -1.461e-9■■■■□ 24.3
TROVE2P10155 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.372e-8■■■■□ 24.2
TROVE2P10155 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC22.28■■□□□ 1.161e-6■■■■□ 24
TROVE2P10155 TBC1D22A-204ENST00000394449 2048 ntTSL 521.86■■□□□ 1.091e-6■■■■□ 24
TROVE2P10155 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.63■■□□□ 1.051e-6■■■■□ 24
TROVE2P10155 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.74■□□□□ 0.271e-6■■■■□ 24
Retrieved 100 of 4,203 protein–RNA pairs in 261.6 ms