Protein–RNA interactions for Protein: P0CX72

TY1A-LR2, Transposon Ty1-LR2 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-LR2P0CX72 YDR336WYDR336W 945 nt7□□□□□ -1.29
TY1A-LR2P0CX72 YLL059CYLL059C 507 nt7□□□□□ -1.29
TY1A-LR2P0CX72 OPT1YJL212C 2400 nt7□□□□□ -1.29
TY1A-LR2P0CX72 MET1YKR069W 1782 nt7□□□□□ -1.29
TY1A-LR2P0CX72 VRP1YLR337C 2454 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 YEL028WYEL028W 462 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 YFL015W-AYFL015W-A 318 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 YBL029C-AYBL029C-A 285 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 ODC2YOR222W 924 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 YDC1YPL087W 954 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 GGA2YHR108W 1758 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 AQR1YNL065W 1761 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 RRP14YKL082C 1305 nt6.99□□□□□ -1.29
TY1A-LR2P0CX72 PEX7YDR142C 1128 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 YEL034C-AYEL034C-A 603 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 MRS4YKR052C 915 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 HIS3YOR202W 663 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 RRS1YOR294W 612 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 RPT5YOR117W 1305 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 SAM50YNL026W 1455 nt6.98□□□□□ -1.29
TY1A-LR2P0CX72 YCR087WYCR087W 516 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 YEA4YEL004W 1029 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 HVG1YER039C 750 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 PRY1YJL079C 900 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 OPI3YJR073C 621 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 HYM1YKL189W 1200 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 YJL045WYJL045W 1905 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 LAG2YOL025W 1983 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 CDC13YDL220C 2775 nt6.97□□□□□ -1.29
TY1A-LR2P0CX72 YRF1-3YGR296W 5580 nt6.96□□□□□ -1.29
TY1A-LR2P0CX72 YRF1-6YNL339C 5580 nt6.96□□□□□ -1.29
TY1A-LR2P0CX72 YRF1-7YPL283C 5580 nt6.96□□□□□ -1.29
TY1A-LR2P0CX72 RPC53YDL150W 1269 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 POP5YAL033W 522 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 STP3YLR375W 1032 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 NCE103YNL036W 666 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 SWT21YNL187W 1074 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 SGF73YGL066W 1974 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 WTM1YOR230W 1314 nt6.96□□□□□ -1.3
TY1A-LR2P0CX72 GRX6YDL010W 696 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 IMO32YGR031W 1029 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 YLF2YHL014C 1218 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 EFM3YJR129C 1020 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 GPI2YPL076W 843 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 IML3YBR107C 738 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 HFI1YPL254W 1467 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 ERG12YMR208W 1332 nt6.95□□□□□ -1.3
TY1A-LR2P0CX72 NDE2YDL085W 1638 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 MMR1YLR190W 1476 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 YCR016WYCR016W 873 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 SCL1YGL011C 759 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 YJR114WYJR114W 393 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 YLL047WYLL047W 384 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 PCD1YLR151C 1023 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 AIM45YPR004C 1035 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 HAL5YJL165C 2568 nt6.94□□□□□ -1.3
TY1A-LR2P0CX72 POB3YML069W 1659 nt6.93□□□□□ -1.3
TY1A-LR2P0CX72 LYS20YDL182W 1287 nt6.93□□□□□ -1.3
TY1A-LR2P0CX72 YFT2YDR319C 825 nt6.93□□□□□ -1.3
TY1A-LR2P0CX72 SUI2YJR007W 915 nt6.93□□□□□ -1.3
TY1A-LR2P0CX72 YLR366WYLR366W 306 nt6.93□□□□□ -1.3
TY1A-LR2P0CX72 MPM1YJL066C 759 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 YKL053WYKL053W 375 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 RPF2YKR081C 1035 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 YPL014WYPL014W 1146 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 YPL136WYPL136W 369 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 OMS1YDR316W 1416 nt6.92□□□□□ -1.3
TY1A-LR2P0CX72 RRT6YGL146C 936 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 YNG2YHR090C 849 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 DCD1YHR144C 939 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 MRPL6YHR147C 645 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 YNL134CYNL134C 1131 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 YOL166CYOL166C 339 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 MRN1YPL184C 1839 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 CHS5YLR330W 2016 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 YBL111CYBL111C 2004 nt6.91□□□□□ -1.3
TY1A-LR2P0CX72 YDL026WYDL026W 312 nt6.9□□□□□ -1.3
TY1A-LR2P0CX72 YFR036W-AYFR036W-A 651 nt6.9□□□□□ -1.3
TY1A-LR2P0CX72 TFB6YOR352W 1032 nt6.9□□□□□ -1.3
TY1A-LR2P0CX72 snR31snR31 225 nt6.9□□□□□ -1.3
TY1A-LR2P0CX72 HXT13YEL069C 1695 nt6.9□□□□□ -1.31
TY1A-LR2P0CX72 MSB3YNL293W 1902 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 YKR018CYKR018C 2178 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 UBC5YDR059C 447 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 THI74YDR438W 1113 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 ERV14YGL054C 417 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 GEP7YGL057C 864 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 AIM23YJL131C 1071 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 YML090WYML090W 387 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 MED4YOR174W 855 nt6.89□□□□□ -1.31
TY1A-LR2P0CX72 PMT3YOR321W 2262 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 YDR514CYDR514C 1452 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 RBS1YDL189W 1374 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 SNF11YDR073W 510 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 ERG26YGL001C 1050 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 YUR1YJL139C 1287 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 SUI3YPL237W 858 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 PMT1YDL095W 2454 nt6.88□□□□□ -1.31
TY1A-LR2P0CX72 SAN1YDR143C 1833 nt6.87□□□□□ -1.31
TY1A-LR2P0CX72 YDR034W-BYDR034W-B 156 nt6.87□□□□□ -1.31
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms