Protein–RNA interactions for Protein: P0C2W7

CT47B1, Cancer/testis antigen 47B, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT47B1P0C2W7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
CT47B1P0C2W7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
CT47B1P0C2W7 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
CT47B1P0C2W7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC31.93■■■□□ 2.7
CT47B1P0C2W7 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
CT47B1P0C2W7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
CT47B1P0C2W7 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
CT47B1P0C2W7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC31.91■■■□□ 2.7
CT47B1P0C2W7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
CT47B1P0C2W7 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
CT47B1P0C2W7 AP004609.3-201ENST00000610705 1884 ntBASIC31.91■■■□□ 2.7
CT47B1P0C2W7 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 MED25-210ENST00000612854 801 ntTSL 5 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 MED25-214ENST00000622402 642 ntTSL 5 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC31.9■■■□□ 2.7
CT47B1P0C2W7 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CT47B1P0C2W7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CT47B1P0C2W7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CT47B1P0C2W7 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
CT47B1P0C2W7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
CT47B1P0C2W7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CT47B1P0C2W7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CT47B1P0C2W7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.88■■■□□ 2.69
CT47B1P0C2W7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CT47B1P0C2W7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
CT47B1P0C2W7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CT47B1P0C2W7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
CT47B1P0C2W7 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CT47B1P0C2W7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CT47B1P0C2W7 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC31.86■■■□□ 2.69
CT47B1P0C2W7 AL359258.2-201ENST00000564063 1566 ntBASIC31.85■■■□□ 2.69
CT47B1P0C2W7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC31.85■■■□□ 2.69
CT47B1P0C2W7 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.85■■■□□ 2.69
CT47B1P0C2W7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC31.85■■■□□ 2.69
CT47B1P0C2W7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 AC126177.7-201ENST00000547904 679 ntBASIC31.84■■■□□ 2.69
CT47B1P0C2W7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CT47B1P0C2W7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CT47B1P0C2W7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.69
CT47B1P0C2W7 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC31.82■■■□□ 2.68
CT47B1P0C2W7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.82■■■□□ 2.68
CT47B1P0C2W7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CT47B1P0C2W7 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CT47B1P0C2W7 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC31.81■■■□□ 2.68
CT47B1P0C2W7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
CT47B1P0C2W7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.81■■■□□ 2.68
CT47B1P0C2W7 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CT47B1P0C2W7 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CT47B1P0C2W7 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CT47B1P0C2W7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CT47B1P0C2W7 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
CT47B1P0C2W7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CT47B1P0C2W7 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
CT47B1P0C2W7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC31.79■■■□□ 2.68
CT47B1P0C2W7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
CT47B1P0C2W7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
CT47B1P0C2W7 MIR4449-201ENST00000578365 66 ntBASIC31.77■■■□□ 2.68
CT47B1P0C2W7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC31.77■■■□□ 2.68
CT47B1P0C2W7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
CT47B1P0C2W7 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC31.75■■■□□ 2.67
CT47B1P0C2W7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC31.75■■■□□ 2.67
CT47B1P0C2W7 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.74■■■□□ 2.67
CT47B1P0C2W7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC31.74■■■□□ 2.67
CT47B1P0C2W7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
CT47B1P0C2W7 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
CT47B1P0C2W7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
CT47B1P0C2W7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC31.73■■■□□ 2.67
CT47B1P0C2W7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC31.73■■■□□ 2.67
CT47B1P0C2W7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CT47B1P0C2W7 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
CT47B1P0C2W7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC31.72■■■□□ 2.67
CT47B1P0C2W7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
CT47B1P0C2W7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC31.71■■■□□ 2.67
CT47B1P0C2W7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
CT47B1P0C2W7 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.71■■■□□ 2.67
CT47B1P0C2W7 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC31.7■■■□□ 2.67
CT47B1P0C2W7 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC31.7■■■□□ 2.67
CT47B1P0C2W7 MBP-237ENST00000579129 1052 ntTSL 5 BASIC31.7■■■□□ 2.67
CT47B1P0C2W7 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
CT47B1P0C2W7 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CT47B1P0C2W7 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
CT47B1P0C2W7 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC31.7■■■□□ 2.66
CT47B1P0C2W7 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC31.7■■■□□ 2.66
CT47B1P0C2W7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms