Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
MMP2P08253 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
MMP2P08253 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC25.11■■□□□ 1.61
MMP2P08253 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
MMP2P08253 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
MMP2P08253 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
MMP2P08253 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.11■■□□□ 1.61
MMP2P08253 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.11■■□□□ 1.61
MMP2P08253 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
MMP2P08253 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.1■■□□□ 1.61
MMP2P08253 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC25.1■■□□□ 1.61
MMP2P08253 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.09■■□□□ 1.61
MMP2P08253 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
MMP2P08253 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.09■■□□□ 1.61
MMP2P08253 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
MMP2P08253 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
MMP2P08253 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.61
MMP2P08253 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MMP2P08253 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MMP2P08253 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
MMP2P08253 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.07■■□□□ 1.6
MMP2P08253 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC25.07■■□□□ 1.6
MMP2P08253 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.07■■□□□ 1.6
MMP2P08253 SRP68-213ENST00000629930 165 ntTSL 5 BASIC25.07■■□□□ 1.6
MMP2P08253 AL359258.2-201ENST00000564063 1566 ntBASIC25.06■■□□□ 1.6
MMP2P08253 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.06■■□□□ 1.6
MMP2P08253 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
MMP2P08253 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.05■■□□□ 1.6
MMP2P08253 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MMP2P08253 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
MMP2P08253 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.05■■□□□ 1.6
MMP2P08253 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.05■■□□□ 1.6
MMP2P08253 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MMP2P08253 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
MMP2P08253 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC25.04■■□□□ 1.6
MMP2P08253 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
MMP2P08253 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC25.03■■□□□ 1.6
MMP2P08253 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MMP2P08253 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
MMP2P08253 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC25.02■■□□□ 1.6
MMP2P08253 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
MMP2P08253 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.02■■□□□ 1.6
MMP2P08253 AP004609.3-201ENST00000610705 1884 ntBASIC25.02■■□□□ 1.6
MMP2P08253 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
MMP2P08253 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MMP2P08253 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.01■■□□□ 1.59
MMP2P08253 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
MMP2P08253 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
MMP2P08253 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
MMP2P08253 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC25.01■■□□□ 1.59
MMP2P08253 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC25■■□□□ 1.59
MMP2P08253 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
MMP2P08253 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25■■□□□ 1.59
MMP2P08253 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MMP2P08253 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MMP2P08253 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MMP2P08253 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
MMP2P08253 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
MMP2P08253 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
MMP2P08253 AC142472.1-201ENST00000612013 1741 ntBASIC24.98■■□□□ 1.59
MMP2P08253 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.98■■□□□ 1.59
MMP2P08253 AC060814.1-201ENST00000554326 538 ntBASIC24.98■■□□□ 1.59
MMP2P08253 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC24.98■■□□□ 1.59
MMP2P08253 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
MMP2P08253 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC24.98■■□□□ 1.59
MMP2P08253 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC24.98■■□□□ 1.59
MMP2P08253 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
MMP2P08253 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC24.97■■□□□ 1.59
MMP2P08253 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
MMP2P08253 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC24.96■■□□□ 1.59
MMP2P08253 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MMP2P08253 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
MMP2P08253 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
MMP2P08253 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC24.96■■□□□ 1.59
MMP2P08253 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.96■■□□□ 1.59
MMP2P08253 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
MMP2P08253 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
MMP2P08253 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.95■■□□□ 1.58
MMP2P08253 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MMP2P08253 AC126177.7-201ENST00000547904 679 ntBASIC24.95■■□□□ 1.58
MMP2P08253 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
MMP2P08253 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC24.95■■□□□ 1.58
MMP2P08253 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
MMP2P08253 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MMP2P08253 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
MMP2P08253 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.94■■□□□ 1.58
MMP2P08253 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC24.94■■□□□ 1.58
MMP2P08253 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.94■■□□□ 1.58
MMP2P08253 AL157400.5-201ENST00000507624 621 ntBASIC24.93■■□□□ 1.58
MMP2P08253 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
MMP2P08253 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
MMP2P08253 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
MMP2P08253 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC24.92■■□□□ 1.58
MMP2P08253 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms