Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Sod1P08228 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sod1P08228 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Sod1P08228 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Sod1P08228 Gm13238-201ENSMUST00000117655 780 ntBASIC21.67■■□□□ 1.06
Sod1P08228 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Sod1P08228 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Sod1P08228 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.65■■□□□ 1.06
Sod1P08228 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Sod1P08228 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Gm43566-201ENSMUST00000196851 808 ntBASIC21.65■■□□□ 1.06
Sod1P08228 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Sod1P08228 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Sod1P08228 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Sod1P08228 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.64■■□□□ 1.05
Sod1P08228 Gm22567-201ENSMUST00000175542 342 ntBASIC21.64■■□□□ 1.05
Sod1P08228 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Sod1P08228 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.63■■□□□ 1.05
Sod1P08228 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Sod1P08228 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.62■■□□□ 1.05
Sod1P08228 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.62■■□□□ 1.05
Sod1P08228 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Sod1P08228 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Sod1P08228 Gm45444-201ENSMUST00000211394 898 ntBASIC21.61■■□□□ 1.05
Sod1P08228 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.61■■□□□ 1.05
Sod1P08228 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Sod1P08228 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.6■■□□□ 1.05
Sod1P08228 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.6■■□□□ 1.05
Sod1P08228 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sod1P08228 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
Sod1P08228 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.59■■□□□ 1.05
Sod1P08228 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sod1P08228 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Sod1P08228 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sod1P08228 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
Sod1P08228 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.58■■□□□ 1.04
Sod1P08228 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.58■■□□□ 1.04
Sod1P08228 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.57■■□□□ 1.04
Sod1P08228 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Sod1P08228 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Sod1P08228 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Sod1P08228 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.54■■□□□ 1.04
Sod1P08228 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Sod1P08228 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Sod1P08228 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Sod1P08228 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sod1P08228 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Sod1P08228 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Sod1P08228 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Sod1P08228 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
Sod1P08228 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sod1P08228 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.51■■□□□ 1.03
Sod1P08228 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sod1P08228 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sod1P08228 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21.5■■□□□ 1.03
Sod1P08228 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Sod1P08228 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.5■■□□□ 1.03
Sod1P08228 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sod1P08228 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
Sod1P08228 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC21.48■■□□□ 1.03
Sod1P08228 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Gm15820-201ENSMUST00000201566 728 ntBASIC21.48■■□□□ 1.03
Sod1P08228 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.48■■□□□ 1.03
Sod1P08228 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sod1P08228 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Sod1P08228 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sod1P08228 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms