Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.48■□□□□ 0.87
CTSDP07339 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.48■□□□□ 0.87
CTSDP07339 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC20.48■□□□□ 0.87
CTSDP07339 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CTSDP07339 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTSDP07339 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
CTSDP07339 AC136428.2-201ENST00000563187 214 ntBASIC20.47■□□□□ 0.87
CTSDP07339 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTSDP07339 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CTSDP07339 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.47■□□□□ 0.87
CTSDP07339 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTSDP07339 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTSDP07339 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTSDP07339 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
CTSDP07339 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.46■□□□□ 0.87
CTSDP07339 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.46■□□□□ 0.87
CTSDP07339 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC20.46■□□□□ 0.87
CTSDP07339 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC20.46■□□□□ 0.87
CTSDP07339 CHML-205ENST00000638160 705 ntTSL 3 BASIC20.46■□□□□ 0.87
CTSDP07339 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CTSDP07339 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
CTSDP07339 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CTSDP07339 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
CTSDP07339 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.44■□□□□ 0.86
CTSDP07339 AC108673.1-201ENST00000510422 1159 ntBASIC20.44■□□□□ 0.86
CTSDP07339 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC20.44■□□□□ 0.86
CTSDP07339 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
CTSDP07339 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CTSDP07339 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.43■□□□□ 0.86
CTSDP07339 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CTSDP07339 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.42■□□□□ 0.86
CTSDP07339 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTSDP07339 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CTSDP07339 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CTSDP07339 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSDP07339 ERN1-208ENST00000606895 2068 ntBASIC20.41■□□□□ 0.86
CTSDP07339 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CTSDP07339 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CTSDP07339 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CTSDP07339 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC20.4■□□□□ 0.86
CTSDP07339 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.4■□□□□ 0.86
CTSDP07339 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CTSDP07339 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC20.4■□□□□ 0.86
CTSDP07339 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CTSDP07339 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CTSDP07339 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CTSDP07339 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.38■□□□□ 0.85
CTSDP07339 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CTSDP07339 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CTSDP07339 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.37■□□□□ 0.85
CTSDP07339 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC20.37■□□□□ 0.85
CTSDP07339 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSDP07339 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CTSDP07339 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC20.36■□□□□ 0.85
CTSDP07339 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CTSDP07339 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CTSDP07339 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSDP07339 AC005559.1-201ENST00000589661 871 ntBASIC20.35■□□□□ 0.85
CTSDP07339 MIR6090-201ENST00000622481 60 ntBASIC20.35■□□□□ 0.85
CTSDP07339 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CTSDP07339 WHAMMP3-201ENST00000611636 1609 ntBASIC20.35■□□□□ 0.85
CTSDP07339 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTSDP07339 AC010501.1-201ENST00000606270 1962 ntBASIC20.34■□□□□ 0.85
CTSDP07339 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSDP07339 AC142381.3-201ENST00000568208 1670 ntBASIC20.34■□□□□ 0.85
CTSDP07339 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CTSDP07339 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTSDP07339 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CTSDP07339 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSDP07339 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CTSDP07339 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CTSDP07339 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CTSDP07339 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CTSDP07339 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.32■□□□□ 0.84
CTSDP07339 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSDP07339 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSDP07339 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSDP07339 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.31■□□□□ 0.84
CTSDP07339 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CTSDP07339 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSDP07339 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.3■□□□□ 0.84
CTSDP07339 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms