Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC26.13■■□□□ 1.77
ERBB2P04626 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ERBB2P04626 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.13■■□□□ 1.77
ERBB2P04626 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ERBB2P04626 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
ERBB2P04626 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ERBB2P04626 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ERBB2P04626 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.13■■□□□ 1.77
ERBB2P04626 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.12■■□□□ 1.77
ERBB2P04626 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ERBB2P04626 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
ERBB2P04626 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC26.12■■□□□ 1.77
ERBB2P04626 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.11■■□□□ 1.77
ERBB2P04626 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ERBB2P04626 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
ERBB2P04626 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ERBB2P04626 AL359258.2-201ENST00000564063 1566 ntBASIC26.09■■□□□ 1.77
ERBB2P04626 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ERBB2P04626 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ERBB2P04626 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.09■■□□□ 1.77
ERBB2P04626 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
ERBB2P04626 MIR4449-201ENST00000578365 66 ntBASIC26.09■■□□□ 1.77
ERBB2P04626 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.09■■□□□ 1.77
ERBB2P04626 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.09■■□□□ 1.77
ERBB2P04626 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.08■■□□□ 1.77
ERBB2P04626 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
ERBB2P04626 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ERBB2P04626 AP004609.3-201ENST00000610705 1884 ntBASIC26.07■■□□□ 1.76
ERBB2P04626 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
ERBB2P04626 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.07■■□□□ 1.76
ERBB2P04626 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ERBB2P04626 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.06■■□□□ 1.76
ERBB2P04626 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ERBB2P04626 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ERBB2P04626 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ERBB2P04626 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ERBB2P04626 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ERBB2P04626 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.05■■□□□ 1.76
ERBB2P04626 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
ERBB2P04626 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ERBB2P04626 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.04■■□□□ 1.76
ERBB2P04626 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.04■■□□□ 1.76
ERBB2P04626 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
ERBB2P04626 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ERBB2P04626 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.03■■□□□ 1.76
ERBB2P04626 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ERBB2P04626 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.03■■□□□ 1.76
ERBB2P04626 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ERBB2P04626 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.03■■□□□ 1.76
ERBB2P04626 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ERBB2P04626 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
ERBB2P04626 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
ERBB2P04626 AC142472.1-201ENST00000612013 1741 ntBASIC26.02■■□□□ 1.76
ERBB2P04626 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
ERBB2P04626 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
ERBB2P04626 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.01■■□□□ 1.75
ERBB2P04626 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ERBB2P04626 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ERBB2P04626 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC25.99■■□□□ 1.75
ERBB2P04626 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ERBB2P04626 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
ERBB2P04626 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.99■■□□□ 1.75
ERBB2P04626 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ERBB2P04626 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC25.99■■□□□ 1.75
ERBB2P04626 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
ERBB2P04626 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.98■■□□□ 1.75
ERBB2P04626 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ERBB2P04626 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
ERBB2P04626 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
ERBB2P04626 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 AC126177.7-201ENST00000547904 679 ntBASIC25.97■■□□□ 1.75
ERBB2P04626 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
ERBB2P04626 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.96■■□□□ 1.75
ERBB2P04626 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC25.96■■□□□ 1.75
ERBB2P04626 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
ERBB2P04626 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.95■■□□□ 1.75
ERBB2P04626 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.95■■□□□ 1.75
ERBB2P04626 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.95■■□□□ 1.74
ERBB2P04626 AC060814.1-201ENST00000554326 538 ntBASIC25.95■■□□□ 1.74
ERBB2P04626 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
ERBB2P04626 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms