Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC20.57■□□□□ 0.88
GAPDHP04406 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
GAPDHP04406 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC20.57■□□□□ 0.88
GAPDHP04406 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
GAPDHP04406 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.56■□□□□ 0.88
GAPDHP04406 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
GAPDHP04406 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
GAPDHP04406 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
GAPDHP04406 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.55■□□□□ 0.88
GAPDHP04406 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.55■□□□□ 0.88
GAPDHP04406 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
GAPDHP04406 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAPDHP04406 AC110285.7-201ENST00000624417 1536 ntBASIC20.54■□□□□ 0.88
GAPDHP04406 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC20.54■□□□□ 0.88
GAPDHP04406 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.54■□□□□ 0.88
GAPDHP04406 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
GAPDHP04406 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC20.54■□□□□ 0.88
GAPDHP04406 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAPDHP04406 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
GAPDHP04406 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAPDHP04406 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC20.53■□□□□ 0.88
GAPDHP04406 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GAPDHP04406 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.53■□□□□ 0.88
GAPDHP04406 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.53■□□□□ 0.88
GAPDHP04406 DUX4L11-201ENST00000611504 1267 ntBASIC20.53■□□□□ 0.88
GAPDHP04406 DUX4L12-201ENST00000614593 1267 ntBASIC20.53■□□□□ 0.88
GAPDHP04406 DUX4L14-201ENST00000621227 1267 ntBASIC20.53■□□□□ 0.88
GAPDHP04406 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GAPDHP04406 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GAPDHP04406 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.52■□□□□ 0.88
GAPDHP04406 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAPDHP04406 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAPDHP04406 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAPDHP04406 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.52■□□□□ 0.88
GAPDHP04406 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GAPDHP04406 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.52■□□□□ 0.88
GAPDHP04406 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GAPDHP04406 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GAPDHP04406 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L13-201ENST00000554103 1267 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L15-201ENST00000611059 1267 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L23-201ENST00000615195 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L24-201ENST00000617576 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L22-201ENST00000618238 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L20-201ENST00000619712 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L21-201ENST00000622058 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L10-201ENST00000622460 1267 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 DUX4L25-201ENST00000624915 1269 ntBASIC20.51■□□□□ 0.87
GAPDHP04406 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GAPDHP04406 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.5■□□□□ 0.87
GAPDHP04406 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GAPDHP04406 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAPDHP04406 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GAPDHP04406 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.48■□□□□ 0.87
GAPDHP04406 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GAPDHP04406 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GAPDHP04406 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.47■□□□□ 0.87
GAPDHP04406 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.47■□□□□ 0.87
GAPDHP04406 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GAPDHP04406 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
GAPDHP04406 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
GAPDHP04406 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.46■□□□□ 0.87
GAPDHP04406 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
GAPDHP04406 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
GAPDHP04406 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC20.45■□□□□ 0.86
GAPDHP04406 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
GAPDHP04406 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.45■□□□□ 0.86
GAPDHP04406 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.45■□□□□ 0.86
GAPDHP04406 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
GAPDHP04406 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.44■□□□□ 0.86
GAPDHP04406 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GAPDHP04406 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GAPDHP04406 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.44■□□□□ 0.86
GAPDHP04406 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.44■□□□□ 0.86
GAPDHP04406 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.44■□□□□ 0.86
GAPDHP04406 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
GAPDHP04406 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
GAPDHP04406 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
GAPDHP04406 AC018358.1-201ENST00000631079 1402 ntBASIC20.44■□□□□ 0.86
GAPDHP04406 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
GAPDHP04406 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.43■□□□□ 0.86
GAPDHP04406 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC20.43■□□□□ 0.86
GAPDHP04406 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.42■□□□□ 0.86
GAPDHP04406 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms