Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRACP01848 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRACP01848 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRACP01848 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRACP01848 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC16.1■□□□□ 0.17
TRACP01848 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC16.1■□□□□ 0.17
TRACP01848 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
TRACP01848 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.1■□□□□ 0.17
TRACP01848 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRACP01848 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.1■□□□□ 0.17
TRACP01848 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRACP01848 AC079834.2-201ENST00000609776 1949 ntBASIC16.09■□□□□ 0.17
TRACP01848 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRACP01848 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC16.09■□□□□ 0.17
TRACP01848 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC16.09■□□□□ 0.17
TRACP01848 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
TRACP01848 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRACP01848 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC16.09■□□□□ 0.17
TRACP01848 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRACP01848 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRACP01848 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRACP01848 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRACP01848 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC16.08■□□□□ 0.16
TRACP01848 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRACP01848 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRACP01848 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TRACP01848 AC010864.1-201ENST00000609407 1511 ntBASIC16.08■□□□□ 0.16
TRACP01848 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRACP01848 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
TRACP01848 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TRACP01848 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRACP01848 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.07■□□□□ 0.16
TRACP01848 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRACP01848 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.06■□□□□ 0.16
TRACP01848 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRACP01848 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRACP01848 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRACP01848 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRACP01848 TMEM202-AS1-202ENST00000565181 2325 ntBASIC16.06■□□□□ 0.16
TRACP01848 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRACP01848 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRACP01848 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.05■□□□□ 0.16
TRACP01848 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRACP01848 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
TRACP01848 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
TRACP01848 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRACP01848 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC16.04■□□□□ 0.16
TRACP01848 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRACP01848 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRACP01848 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TRACP01848 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TRACP01848 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC16.04■□□□□ 0.16
TRACP01848 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRACP01848 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRACP01848 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TRACP01848 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TRACP01848 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
TRACP01848 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
TRACP01848 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.03■□□□□ 0.16
TRACP01848 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRACP01848 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRACP01848 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRACP01848 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRACP01848 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRACP01848 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRACP01848 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRACP01848 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRACP01848 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC16.01■□□□□ 0.15
TRACP01848 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 AC142381.3-201ENST00000568208 1670 ntBASIC16■□□□□ 0.15
TRACP01848 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
TRACP01848 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRACP01848 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRACP01848 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
TRACP01848 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRACP01848 PREB-202ENST00000406567 1910 ntTSL 5 BASIC15.98■□□□□ 0.15
TRACP01848 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRACP01848 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRACP01848 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRACP01848 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC15.97■□□□□ 0.15
TRACP01848 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRACP01848 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRACP01848 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms