Protein–RNA interactions for Protein: P01739

T-cell receptor alpha chain V region 2B4, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01739 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
P01739 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
P01739 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
P01739 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P01739 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.85■□□□□ 0.29
P01739 Gm4799-201ENSMUST00000095396 657 ntBASIC16.85■□□□□ 0.29
P01739 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
P01739 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
P01739 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
P01739 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC16.84■□□□□ 0.29
P01739 Gm7432-201ENSMUST00000210343 879 ntBASIC16.84■□□□□ 0.29
P01739 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.84■□□□□ 0.29
P01739 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
P01739 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01739 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01739 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01739 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
P01739 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC16.83■□□□□ 0.28
P01739 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
P01739 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
P01739 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
P01739 Gm13889-201ENSMUST00000099689 1386 ntBASIC16.83■□□□□ 0.28
P01739 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01739 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
P01739 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01739 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01739 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
P01739 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
P01739 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.82■□□□□ 0.28
P01739 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
P01739 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.81■□□□□ 0.28
P01739 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
P01739 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
P01739 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.8■□□□□ 0.28
P01739 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
P01739 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC16.8■□□□□ 0.28
P01739 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
P01739 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01739 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01739 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01739 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
P01739 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
P01739 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
P01739 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC16.78■□□□□ 0.28
P01739 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
P01739 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
P01739 Gm11599-201ENSMUST00000118720 878 ntBASIC16.78■□□□□ 0.28
P01739 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
P01739 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01739 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
P01739 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
P01739 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01739 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
P01739 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01739 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.76■□□□□ 0.27
P01739 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
P01739 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
P01739 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01739 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
P01739 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.76■□□□□ 0.27
P01739 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
P01739 Mir3960-201ENSMUST00000198213 73 ntBASIC16.75■□□□□ 0.27
P01739 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
P01739 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
P01739 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
P01739 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
P01739 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
P01739 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
P01739 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
P01739 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
P01739 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01739 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01739 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01739 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
P01739 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
P01739 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01739 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01739 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.72■□□□□ 0.27
P01739 Gm9812-201ENSMUST00000061934 968 ntBASIC16.72■□□□□ 0.27
P01739 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01739 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
P01739 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
P01739 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
P01739 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01739 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
P01739 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
P01739 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC16.71■□□□□ 0.27
P01739 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
P01739 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms