Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTAP01374 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LTAP01374 LINC00273-201ENST00000539813 1452 ntBASIC18.58■□□□□ 0.57
LTAP01374 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTAP01374 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
LTAP01374 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
LTAP01374 RPS2-209ENST00000529806 993 ntTSL 3 BASIC18.58■□□□□ 0.56
LTAP01374 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.58■□□□□ 0.56
LTAP01374 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTAP01374 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
LTAP01374 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
LTAP01374 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
LTAP01374 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTAP01374 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
LTAP01374 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTAP01374 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTAP01374 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
LTAP01374 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.57■□□□□ 0.56
LTAP01374 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LTAP01374 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTAP01374 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTAP01374 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LTAP01374 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LTAP01374 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.54■□□□□ 0.56
LTAP01374 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTAP01374 MIR762-201ENST00000390236 83 ntBASIC18.54■□□□□ 0.56
LTAP01374 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LTAP01374 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LTAP01374 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LTAP01374 LTK-203ENST00000453182 2412 ntTSL 2 BASIC18.53■□□□□ 0.56
LTAP01374 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC18.53■□□□□ 0.56
LTAP01374 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
LTAP01374 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTAP01374 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTAP01374 AC142381.3-201ENST00000568208 1670 ntBASIC18.53■□□□□ 0.56
LTAP01374 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LTAP01374 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTAP01374 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LTAP01374 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.53■□□□□ 0.56
LTAP01374 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.52■□□□□ 0.56
LTAP01374 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC18.52■□□□□ 0.56
LTAP01374 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTAP01374 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
LTAP01374 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LTAP01374 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LTAP01374 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LTAP01374 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
LTAP01374 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC18.52■□□□□ 0.55
LTAP01374 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LTAP01374 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LTAP01374 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
LTAP01374 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
LTAP01374 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
LTAP01374 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTAP01374 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC18.51■□□□□ 0.55
LTAP01374 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTAP01374 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
LTAP01374 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LTAP01374 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.5■□□□□ 0.55
LTAP01374 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTAP01374 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTAP01374 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.5■□□□□ 0.55
LTAP01374 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LTAP01374 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
LTAP01374 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTAP01374 AC010501.1-201ENST00000606270 1962 ntBASIC18.5■□□□□ 0.55
LTAP01374 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTAP01374 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
LTAP01374 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
LTAP01374 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.5■□□□□ 0.55
LTAP01374 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTAP01374 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.49■□□□□ 0.55
LTAP01374 AC136428.2-201ENST00000563187 214 ntBASIC18.49■□□□□ 0.55
LTAP01374 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.49■□□□□ 0.55
LTAP01374 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LTAP01374 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
LTAP01374 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTAP01374 AC108673.1-201ENST00000510422 1159 ntBASIC18.48■□□□□ 0.55
LTAP01374 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
LTAP01374 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LTAP01374 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTAP01374 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.47■□□□□ 0.55
LTAP01374 WHAMMP3-201ENST00000611636 1609 ntBASIC18.47■□□□□ 0.55
LTAP01374 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LTAP01374 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LTAP01374 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.46■□□□□ 0.55
LTAP01374 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTAP01374 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTAP01374 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTAP01374 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.45■□□□□ 0.54
LTAP01374 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LTAP01374 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
LTAP01374 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.45■□□□□ 0.54
LTAP01374 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.45■□□□□ 0.54
LTAP01374 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms