Protein–RNA interactions for Protein: O95777

LSM8, U6 snRNA-associated Sm-like protein LSm8, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8O95777 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
LSM8O95777 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
LSM8O95777 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
LSM8O95777 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.23■■□□□ 1.79
LSM8O95777 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LSM8O95777 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
LSM8O95777 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
LSM8O95777 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
LSM8O95777 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
LSM8O95777 AC142472.1-201ENST00000612013 1741 ntBASIC26.22■■□□□ 1.79
LSM8O95777 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.22■■□□□ 1.79
LSM8O95777 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LSM8O95777 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
LSM8O95777 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.21■■□□□ 1.79
LSM8O95777 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.21■■□□□ 1.79
LSM8O95777 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
LSM8O95777 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.2■■□□□ 1.79
LSM8O95777 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.78
LSM8O95777 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
LSM8O95777 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LSM8O95777 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.2■■□□□ 1.78
LSM8O95777 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
LSM8O95777 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSM8O95777 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
LSM8O95777 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
LSM8O95777 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.18■■□□□ 1.78
LSM8O95777 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.18■■□□□ 1.78
LSM8O95777 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.18■■□□□ 1.78
LSM8O95777 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC26.18■■□□□ 1.78
LSM8O95777 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LSM8O95777 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LSM8O95777 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.17■■□□□ 1.78
LSM8O95777 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
LSM8O95777 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
LSM8O95777 MIR639-201ENST00000384974 98 ntBASIC26.16■■□□□ 1.78
LSM8O95777 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
LSM8O95777 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.16■■□□□ 1.78
LSM8O95777 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.16■■□□□ 1.78
LSM8O95777 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LSM8O95777 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LSM8O95777 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
LSM8O95777 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
LSM8O95777 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
LSM8O95777 AL359258.2-201ENST00000564063 1566 ntBASIC26.14■■□□□ 1.78
LSM8O95777 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.13■■□□□ 1.77
LSM8O95777 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
LSM8O95777 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.13■■□□□ 1.77
LSM8O95777 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
LSM8O95777 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.13■■□□□ 1.77
LSM8O95777 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.12■■□□□ 1.77
LSM8O95777 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
LSM8O95777 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.12■■□□□ 1.77
LSM8O95777 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.12■■□□□ 1.77
LSM8O95777 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
LSM8O95777 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.11■■□□□ 1.77
LSM8O95777 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSM8O95777 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.11■■□□□ 1.77
LSM8O95777 AC126177.7-201ENST00000547904 679 ntBASIC26.11■■□□□ 1.77
LSM8O95777 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSM8O95777 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
LSM8O95777 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.11■■□□□ 1.77
LSM8O95777 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSM8O95777 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
LSM8O95777 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
LSM8O95777 RPS2-202ENST00000526522 924 ntTSL 2 BASIC26.1■■□□□ 1.77
LSM8O95777 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC26.1■■□□□ 1.77
LSM8O95777 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
LSM8O95777 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC26.09■■□□□ 1.77
LSM8O95777 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
LSM8O95777 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.09■■□□□ 1.77
LSM8O95777 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
LSM8O95777 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
LSM8O95777 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC26.08■■□□□ 1.77
LSM8O95777 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
LSM8O95777 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.08■■□□□ 1.76
LSM8O95777 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LSM8O95777 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
LSM8O95777 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC26.07■■□□□ 1.76
LSM8O95777 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LSM8O95777 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.06■■□□□ 1.76
LSM8O95777 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC26.05■■□□□ 1.76
LSM8O95777 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSM8O95777 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC26.05■■□□□ 1.76
LSM8O95777 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LSM8O95777 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
LSM8O95777 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSM8O95777 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSM8O95777 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LSM8O95777 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms